RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF222Q9UK12 451 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 SHISA3A0PJX4 238 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 AGRPO00253 132 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 LRRTM2O43300 516 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 TBX19O60806 448 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 MMP20O60882 483 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 EPHX1P07099 455 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 CTSAP10619 480 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 MYOGP15173 224 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 HMGA1P17096 107 aaKnown RBP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 BDH1Q02338 343 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 GALEQ14376 348 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 RFLNAQ6ZTI6 216 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OR4K5Q8NGD3 323 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 WDR48Q8TAF3 677 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OR5P2Q8WZ92 322 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 VOPP1Q96AW1 172 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OTUB1Q96FW1 271 aaPredicted RBP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 MSANTD3Q96H12 275 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 SLC38A2Q96QD8 506 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 BTBD1Q9H0C5 482 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 ERVMER34-1Q9H9K5 563 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 LYARQ9NX58 379 aaKnown RBP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 TAAR2Q9P1P5 351 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 GTPBP1O00178 669 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 NPC1O15118 1278 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 NCR1O76036 304 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SLC16A8O95907 504 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 PAHP00439 452 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 OR12D1P0DN82 309 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 IL32P24001 234 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 EPHA4P54764 986 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SHC2P98077 582 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF155Q12901 538 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 EXOSC2Q13868 293 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 MPPE1Q53F39 396 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 HBMQ6B0K9 141 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SLC27A4Q6P1M0 643 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 ADGRD2Q7Z7M1 963 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 TMPRSS11BQ86T26 416 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 KLHL36Q8N4N3 616 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 MORN4Q8NDC4 146 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 RFKQ969G6 155 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 FNDC11Q9BVV2 318 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF275Q9NSD4 429 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 LIPT1Q9Y234 373 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 DNMT3AQ9Y6K1 912 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 GRXCR1A8MXD5 290 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 RAB14P61106 215 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SNRPD1P62314 119 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 POU4F3Q15319 338 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 NTRK2Q16620 822 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 HIST2H2AA3Q6FI13 130 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SPRED2Q7Z698 418 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 OAFQ86UD1 273 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 RBM45Q8IUH3 476 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 FBXO15Q8NCQ5 510 aaPredicted RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 TIFAQ96CG3 184 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 OSGEPL1Q9H4B0 414 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 SUV39H2Q9H5I1 410 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 NEUROD4Q9HD90 331 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 MIEF1Q9NQG6 463 aa16.4■□□□□ 0.22
CHTOP-203ENST00000368690 IMP3Q9NV31 184 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 EXOGQ9Y2C4 368 aaKnown RBP16.4■□□□□ 0.22
CHTOP-203ENST00000368690 MEIKINA0A087WXM9 373 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 LALBAP00709 142 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 GBAP04062 536 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 IL3P08700 152 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 C1GALT1C1LP0DN25 315 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 PITPNBP48739 271 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 EPHB3P54753 998 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 CNTN1Q12860 1018 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 CCDC85BQ15834 202 aaPredicted RBP16.39■□□□□ 0.21
CHTOP-203ENST00000368690 C9orf50Q5SZB4 431 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 TBC1D19Q8N5T2 526 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 TEX47Q8TBZ9 253 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 SLC9A6Q92581 669 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 NXPE2Q96DL1 559 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 TMED9Q9BVK6 235 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 ENAMQ9NRM1 1142 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 MAN2C1Q9NTJ4 1040 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 SEC14L3Q9UDX4 400 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 ITM2BQ9Y287 266 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 INSL5Q9Y5Q6 135 aa16.39■□□□□ 0.21
CHTOP-203ENST00000368690 CIB4A0PJX0 185 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-203ENST00000368690 TGM5O43548 720 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 IGHA1P01876 353 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 KLK1P06870 262 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 NPR2P20594 1047 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 ACSL1P33121 698 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 SOX18P35713 384 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 ERVFC1P60507 584 aa16.38■□□□□ 0.21
CHTOP-203ENST00000368690 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
CHTOP-203ENST00000368690 CAMK2DQ13557 499 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms