RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 NFATC2Q13469 925 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 DYRK1AQ13627 763 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 GK2Q14410 553 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-201ENST00000368686 SF1Q15637 639 aaKnown RBP16.91■□□□□ 0.3
CHTOP-201ENST00000368686 ZXDCQ2QGD7 858 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-201ENST00000368686 EOGTQ5NDL2 527 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 SFRP5Q5T4F7 317 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 ACSM5Q6NUN0 579 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 LHFPL3Q86UP9 236 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 KLHL36Q8N4N3 616 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 SLC22A8Q8TCC7 542 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHTOP-201ENST00000368686 HMX1Q9NP08 348 aaPredicted RBP16.91■□□□□ 0.3
CHTOP-201ENST00000368686 CTSFQ9UBX1 484 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 MAP4K5Q9Y4K4 846 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 KIAA1671Q9BY89 1806 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 TTC3P53804 2025 aa16.91■□□□□ 0.3
CHTOP-201ENST00000368686 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 A0A1B0GVC2 190 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 A6NIN4 97 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 AGAP14A8MT82 685 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 FZD7O75084 574 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 RPL9P32969 192 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 KCNJ5P48544 419 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 RAE1P78406 368 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 SNTB2Q13425 540 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 LIPJQ5W064 366 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 RAB11FIP2Q7L804 512 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 TRMT11Q7Z4G4 463 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 FBXO15Q8NCQ5 510 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 FAM71CQ8NEG0 241 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 ASB8Q9H765 288 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 BEX1Q9HBH7 125 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 GKN1Q9NS71 199 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 PIPOXQ9P0Z9 390 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 MGAT4CQ9UBM8 478 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 AFF4Q9UHB7 1163 aaKnown RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 FBXW2Q9UKT8 454 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 CA5BQ9Y2D0 317 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 CCDC88CQ9P219 2028 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 CASTOR2A6NHX0 329 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 PRR23D1E9PI22 279 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 F8W810 466 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 SUSD5O60279 629 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 UGDHO60701 494 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 NME6O75414 186 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 ITGA10O75578 1167 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 UBL3O95164 117 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 C6orf47O95873 294 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 MT-ND4P03905 459 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 PRR23D2P0DMB1 279 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 HSD3B1P14060 373 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 GABRA1P14867 456 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 HSD3B2P26439 372 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 LYPLAL1Q5VWZ2 237 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 TCTN3Q6NUS6 607 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
CHTOP-201ENST00000368686 WDR20Q8TBZ3 569 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 C10orf90Q96M02 699 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 PTGFRNQ9P2B2 879 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 SEC14L3Q9UDX4 400 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 ACSL6Q9UKU0 697 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 SLC22A14Q9Y267 594 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 RASD1Q9Y272 281 aa16.9■□□□□ 0.3
CHTOP-201ENST00000368686 A0A1B0GUH1 482 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 ARHGEF33A8MVX0 844 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 GALR3O60755 368 aaPredicted RBP16.89■□□□□ 0.29
CHTOP-201ENST00000368686 F11P03951 625 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 HFEQ30201 348 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 VASNQ6EMK4 673 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 REEP3Q6NUK4 255 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 OR4K1Q8NGD4 311 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 OR5M9Q8NGP3 310 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 OR52N1Q8NH53 320 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 MYEOVQ96EZ4 313 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 MTERF1Q99551 399 aaKnown RBP16.89■□□□□ 0.29
CHTOP-201ENST00000368686 FUZQ9BT04 418 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 SPON2Q9BUD6 331 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 IFT27Q9BW83 186 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 FAIM2Q9BWQ8 316 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 BTBD1Q9H0C5 482 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 MTG2Q9H4K7 406 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 WDR26Q9H7D7 661 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 BABAM2Q9NXR7 383 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 MEIS3P2A8K0S8 358 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 LINC00587B1AMM8 73 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 TEX46H3BTG2 121 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 RASGRP1O95267 797 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 SNAPINO95295 136 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 DRD5P21918 477 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 ACRV1P26436 265 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 OPRD1P41143 372 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 IRF8Q02556 426 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 PLD1Q13393 1074 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 HTR4Q13639 388 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 DDX39BQ13838 428 aaKnown RBP16.89■□□□□ 0.29
CHTOP-201ENST00000368686 ATP13A5Q4VNC0 1218 aa16.89■□□□□ 0.29
CHTOP-201ENST00000368686 ZNF385BQ569K4 471 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms