RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 FAIM2Q9BWQ8 316 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 OR2B2Q9GZK3 357 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ACSS3Q9H6R3 686 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 PLEKHF2Q9H8W4 249 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ANKRA2Q9H9E1 313 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 PRODH2Q9UF12 536 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 FETUBQ9UGM5 382 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF639Q9UID6 485 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 SNX6Q9UNH7 406 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 EXO1Q9UQ84 846 aaKnown RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 RPH3AQ9Y2J0 694 aaPredicted RBP9.4□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
CLRN3-201ENST00000368671 C2CD3Q4AC94 2353 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 PRRC2AP48634 2157 aaKnown RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 SH3D21A4FU49 640 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 FRG2CA6NGY1 282 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 PPP6CO00743 305 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 NME6O75414 186 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 OR4F21O95013 312 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 RCBTB2O95199 551 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 OTCP00480 354 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 HRGP04196 525 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 RPS17P08708 135 aaKnown RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 FOSL1P15407 271 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 DRD5P21918 477 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 CPOXP36551 454 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 MAGEA12P43365 314 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 PPICP45877 212 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 EMDP50402 254 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 DCAF7P61962 342 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 SNTA1Q13424 505 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 TSNAXIP1Q2TAA8 658 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 TCHHL1Q5QJ38 904 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 TEX35Q5T0J7 233 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 C10orf62Q5T681 223 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 OR5M10Q6IEU7 315 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 LETMD1Q6P1Q0 360 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 PLCZ1Q86YW0 608 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 C17orf53Q8N3J3 647 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF483Q8TF39 744 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 CTHRC1Q96CG8 243 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 CNRIP1Q96F85 164 aaPredicted RBP9.39□□□□□ -0.91
CLRN3-201ENST00000368671 DOCK7Q96N67 2140 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 SFXN2Q96NB2 322 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 ZFP3Q96NJ6 502 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 COL21A1Q96P44 957 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 SMR3AQ99954 134 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 LRRC1Q9BTT6 524 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 ZDHHC18Q9NUE0 388 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 TAS2R10Q9NYW0 307 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 DKKL1Q9UK85 242 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 FBXL2Q9UKC9 423 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 UTS2RQ9UKP6 389 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 PSME2Q9UL46 239 aa9.39□□□□□ -0.91
CLRN3-201ENST00000368671 A0A1W2PPR1 153 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 A8MT66 165 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 POC1B-GALNT4F8VUJ3 575 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 PLOD2O00469 737 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 CASKO14936 926 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 TO15178 435 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 GOSR1O95249 250 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 THBS1P07996 1170 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 CD53P19397 219 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 IL12BP29460 328 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ADSLP30566 484 aaPredicted RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 SRD5A2P31213 254 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 KRT20P35900 424 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 LHX2P50458 406 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 DIO3P55073 304 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 GFRA1P56159 465 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 HMGCS1Q01581 520 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF628Q5EBL2 1059 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 AAGABQ6PD74 315 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 TAOK1Q7L7X3 1001 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 P4HA3Q7Z4N8 544 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 GRAMD2AQ8IUY3 354 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 OR9A2Q8NGT5 310 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 UHMK1Q8TAS1 419 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 KAT2AQ92830 837 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ISL2Q96A47 359 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 EXOSC8Q96B26 276 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ZNF681Q96N22 645 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 DACH2Q96NX9 599 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ADOQ96SZ5 270 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 PAFAH2Q99487 392 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 G6PC3Q9BUM1 346 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 MRPL46Q9H2W6 279 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 ACBD3Q9H3P7 528 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 CDC42EP4Q9H3Q1 356 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 PIGMQ9H3S5 423 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 BRF2Q9HAW0 419 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 NMRK1Q9NWW6 199 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 CLCF1Q9UBD9 225 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 HEY2Q9UBP5 337 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 TRPS1Q9UHF7 1281 aa9.38□□□□□ -0.91
CLRN3-201ENST00000368671 EIF3LQ9Y262 564 aaKnown RBP9.38□□□□□ -0.91
CLRN3-201ENST00000368671 GPR55Q9Y2T6 319 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms