RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC22A2O15244 555 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 DPM1O60762 260 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 COX4I1P13073 169 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 ABCD3P28288 659 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 HLCSP50747 726 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 PLCXD2Q0VAA5 305 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 OR1C1Q15619 314 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 SAXO2Q658L1 398 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
TPM3-211ENST00000368531 IGFL2Q6UWQ7 119 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 LYPD8Q6UX82 237 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 GALNT10Q86SR1 603 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 PTRH1Q86Y79 214 aaKnown RBP12.82□□□□□ -0.36
TPM3-211ENST00000368531 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 SLC15A4Q8N697 577 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 RBMXL3Q8N7X1 1067 aaKnown RBP12.82□□□□□ -0.36
TPM3-211ENST00000368531 COX18Q8N8Q8 333 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 ANKS4BQ8N8V4 417 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 FAM13CQ8NE31 585 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 C17orf47Q8NEP4 570 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 ADAMTS15Q8TE58 950 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 ZFP90Q8TF47 636 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 HAS2Q92819 552 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 CDS1Q92903 461 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 RAB8BQ92930 207 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 NEURL3Q96EH8 262 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 RMND5BQ96G75 393 aaPredicted RBP12.82□□□□□ -0.36
TPM3-211ENST00000368531 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 UBL7Q96S82 380 aaPredicted RBP12.82□□□□□ -0.36
TPM3-211ENST00000368531 SLC25A18Q9H1K4 315 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 TPT1P8Q9HAU6 139 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 Q9N2J8 555 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 VAPAQ9P0L0 249 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 MAP10Q9P2G4 905 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 ZFHX4Q86UP3 3567 aa12.82□□□□□ -0.36
TPM3-211ENST00000368531 CLIC1O00299 241 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 AIM2O14862 343 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 ACOX3O15254 700 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 UNC5CO95185 931 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 KRT75O95678 551 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 ZCCHC18P0CG32 403 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 OR12D1P0DN82 309 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 SFTPCP11686 197 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 PTPN6P29350 595 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 IL12BP29460 328 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 KRT20P35900 424 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 FBXW4P57775 412 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 CBX1P83916 185 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 STX5Q13190 355 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 CAPRIN1Q14444 709 aaKnown RBP12.81□□□□□ -0.36
TPM3-211ENST00000368531 NADK2Q4G0N4 442 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 COX20Q5RI15 118 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
TPM3-211ENST00000368531 CCNJQ5T5M9 372 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 ZCCHC12Q6PEW1 402 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 FIGNL1Q6PIW4 674 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 DHDDSQ86SQ9 333 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 SLC34A3Q8N130 599 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 HORMAD2Q8N7B1 307 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 RP9Q8TA86 221 aaKnown RBP12.81□□□□□ -0.36
TPM3-211ENST00000368531 XAGE5Q8WWM1 108 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
TPM3-211ENST00000368531 RCN3Q96D15 328 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 SPACA9Q96E40 222 aaPredicted RBP12.81□□□□□ -0.36
TPM3-211ENST00000368531 HES7Q9BYE0 225 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 TRIM8Q9BZR9 551 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 CBLCQ9ULV8 474 aa12.81□□□□□ -0.36
TPM3-211ENST00000368531 TTC36A6NLP5 189 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 CAPN14A8MX76 684 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 G3V3Y1 287 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 TO15178 435 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 PPM1BO75688 479 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 NKX2-2O95096 273 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 KRT16P08779 473 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 FBXO45P0C2W1 286 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
TPM3-211ENST00000368531 MAP3K8P41279 467 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 CRATP43155 626 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 CPA2P48052 419 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 KHKP50053 298 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 TNFSF10P50591 281 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 POU6F2P78424 691 aaPredicted RBP12.8□□□□□ -0.36
TPM3-211ENST00000368531 MRPS22P82650 360 aaKnown RBP12.8□□□□□ -0.36
TPM3-211ENST00000368531 DECR1Q16698 335 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 ZNF791Q3KP31 576 aaPredicted RBP12.8□□□□□ -0.36
TPM3-211ENST00000368531 CYP27C1Q4G0S4 372 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 LRIF1Q5T3J3 769 aa12.8□□□□□ -0.36
TPM3-211ENST00000368531 DLEU7Q6UYE1 221 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms