RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ZDHHC11Q9H8X9 412 aa20.59■□□□□ 0.89
ECHDC1-203ENST00000368291 PLSCR2Q9NRY7 297 aa20.59■□□□□ 0.89
ECHDC1-203ENST00000368291 LRRC3CA6NJW4 275 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 FAM166BA8MTA8 275 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 DDX5P17844 614 aaKnown RBP20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 PTGDSP41222 190 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 WNT3P56703 355 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 PLGLB1Q02325 96 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 TMEM81Q6P7N7 255 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 NUP54Q7Z3B4 507 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 FGD2Q7Z6J4 655 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 TMEM251Q8N6I4 163 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 PSMA8Q8TAA3 256 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 LRRC8CQ8TDW0 803 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 SLC35A4Q96G79 324 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 PRPF18Q99633 342 aaKnown RBP20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 ANGPTL4Q9BY76 406 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 BHLHE41Q9C0J9 482 aaPredicted RBP20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 INTS9Q9NV88 658 aaKnown RBP20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 ATAD3AQ9NVI7 634 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 ERRFI1Q9UJM3 462 aaPredicted RBP20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 ZNF835Q9Y2P0 537 aa20.58■□□□□ 0.88
ECHDC1-203ENST00000368291 PCNX3Q9H6A9 2034 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 COL12A1Q99715 3063 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 TRIM3O75382 744 aaPredicted RBP20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 REM1O75628 298 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 C6orf47O95873 294 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 RFPL3SP0C7P2 107 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 RNF224P0DH78 156 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 KCNJ2P63252 427 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 GAB1Q13480 694 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 FNDC7Q5VTL7 733 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 GHDCQ8N2G8 530 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 NATD1Q8N6N6 113 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 NUP43Q8NFH3 380 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 OR5P2Q8WZ92 322 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 FAM120BQ96EK7 910 aaKnown RBP20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 TEX37Q96LM6 180 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 RILPQ96NA2 401 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 DOHHQ9BU89 302 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 DUSP26Q9BV47 211 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 DPY30Q9C005 99 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 DEFB127Q9H1M4 99 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 AIG1Q9NVV5 245 aa20.57■□□□□ 0.88
ECHDC1-203ENST00000368291 UQCRHLA0A096LP55 91 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 OR6C70A6NIJ9 312 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 EMC8O43402 210 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 MAGEA5P43359 124 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 PHC1P78364 1004 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 PGS1Q32NB8 556 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 TBCELQ5QJ74 424 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 EXOSC6Q5RKV6 272 aaKnown RBP20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 OR4F3Q6IEY1 312 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 RGS9BPQ6ZS82 235 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 SPATA19Q7Z5L4 167 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 SLC22A16Q86VW1 577 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 OR8J2Q8NGG1 315 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 CKAP2Q8WWK9 683 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 COL21A1Q96P44 957 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 ADOQ96SZ5 270 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 CXorf36Q9H7Y0 433 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 ZFP64Q9NPA5 681 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 EQTNQ9NQ60 294 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 MAPRE3Q9UPY8 281 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 GPR45Q9Y5Y3 372 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 USH1CQ9Y6N9 552 aa20.56■□□□□ 0.88
ECHDC1-203ENST00000368291 ACOT7O00154 380 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 SCN2BO60939 215 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 CELA3AP09093 270 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 PRKAG1P54619 331 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 PSPHP78330 225 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 Q6ZPB1 254 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 FAM109AQ8N4B1 249 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 CEP70Q8NHQ1 597 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 ACTRT2Q8TDY3 377 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 RNF138Q8WVD3 245 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 DYDC1Q8WWB3 177 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 TESCQ96BS2 214 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 EFHD2Q96C19 240 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 OR52B2Q96RD2 323 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 ZNF703Q9H7S9 590 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 C3orf14Q9HBI5 128 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 BOKQ9UMX3 212 aaPredicted RBP20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 LIPGQ9Y5X9 500 aa20.55■□□□□ 0.88
ECHDC1-203ENST00000368291 A0A1B0GTH9 108 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 SLC19A2O60779 497 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 ABCB7O75027 752 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 PDE9AO76083 593 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 NKX2-2O95096 273 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 SNX4O95219 450 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 ACP2P11117 423 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 IL12AP29459 219 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 PNLIPRP2P54317 469 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 UFM1P61960 85 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 HBA1P69905 142 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 RPP38P78345 283 aaKnown RBP20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 LSM12Q3MHD2 195 aaKnown RBP20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 CYP27C1Q4G0S4 372 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 C4orf17Q53FE4 359 aa20.54■□□□□ 0.88
ECHDC1-203ENST00000368291 C1QL3Q5VWW1 255 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms