RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LIN28AQ9H9Z2 209 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 MAP10Q9P2G4 905 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 UBR3Q6ZT12 1888 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 COL24A1Q17RW2 1714 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 A6NIZ1 184 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 SOX1O00570 391 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 GCAP28676 217 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 RAP1BP61224 184 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 RAP1AP62834 184 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 MEF2AQ02078 507 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 GAL3ST3Q96A11 431 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC17A9Q9BYT1 436 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 MCCC2Q9HCC0 563 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 GPR83Q9NYM4 423 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 H7C417 338 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 CDK1P06493 297 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 GTF2F2P13984 249 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 PITPNBP48739 271 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 TMEM40Q8WWA1 233 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 MMABQ96EY8 250 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 BTBD2Q9BX70 525 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 STRADBQ9C0K7 418 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 H0YIV9 168 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 CHRFAM7AQ494W8 412 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC5A8Q8N695 610 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC6A5Q9Y345 797 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 PTGDR2Q9Y5Y4 395 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 ANKRD28O15084 1053 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 CRHBPP24387 322 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 TAP2Q03519 686 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 GFOD2Q3B7J2 385 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 C17orf99Q6UX52 265 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF471Q9BX82 626 aaPredicted RBP11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 NPAP1Q9NZP6 1156 aa11.42□□□□□ -0.58
CDC42BPA-203ENST00000366766 LATO43561 262 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 RAB3BP20337 219 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 BMXP51813 675 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 MC1RQ01726 317 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 LRRC28Q86X40 367 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 TRIB2Q92519 343 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 SNAPC3Q92966 411 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 RNF121Q9H920 327 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 COL5A3P25940 1745 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 KIR2DS5A0A0G2JLQ3 304 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 A0A0G2JNG1 304 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 TTC34A8MYJ7 566 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 KIR2DS3K7RE56 304 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ACOT7O00154 380 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 SDC1P18827 310 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 KIR2DS5Q14953 304 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 HS3ST2Q9Y278 367 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 F7P08709 466 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 HOXB9P17482 250 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 CPOXP36551 454 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 NETO1Q8TDF5 533 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 LMF2Q9BU23 707 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 NUBP2Q9Y5Y2 271 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 GLI3P10071 1580 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 HLA-EP13747 358 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 VSX2P58304 361 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 C1orf189Q5VU69 101 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 GPR139Q6DWJ6 353 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZSCAN4Q8NAM6 433 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 OR6N2Q8NGY6 317 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ZNF587Q96SQ5 575 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 TIMM29Q9BSF4 260 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 RAB9BQ9NP90 201 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 OR1A2Q9Y585 309 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 OR2T1O43869 369 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 MAGEA12P43365 314 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 SELENOVP59797 346 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 SF3A2Q15428 464 aaKnown RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 PRLP01236 227 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 H2BFMP0C1H6 154 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 IL1RNP18510 177 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 CDKN1CP49918 316 aaPredicted RBP11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 DEFA5Q01523 94 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 FAM198BQ6UWH4 519 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 LRRTM3Q86VH5 581 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ANKK1Q8NFD2 765 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 DTD2Q96FN9 168 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 CDC6Q99741 560 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 VAPAQ9P0L0 249 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 ALPLP05186 524 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 CNR2P34972 360 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 LAPTM4AQ15012 233 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 NTRK2Q16620 822 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 MLIPQ5VWP3 458 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 NINJ1Q92982 152 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 PMEPA1Q969W9 287 aa11.41□□□□□ -0.58
CDC42BPA-203ENST00000366766 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms