RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ADAMTSL2Q86TH1 951 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 TBC1D1Q86TI0 1168 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 TRIM73Q86UV7 250 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 RAB42Q8N4Z0 105 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 C2orf73Q8N5S3 287 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 BOLLQ8N9W6 283 aaKnown RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 OR2A1Q8NGT9 310 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 CT55Q8WUE5 264 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 GATA5Q9BWX5 397 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 NLNQ9BYT8 704 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 ALG9Q9H6U8 611 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 ACTR5Q9H9F9 607 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 AKIRIN1Q9H9L7 192 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 NMRAL1Q9HBL8 299 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 SLC22A11Q9NSA0 550 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 THAP1Q9NVV9 213 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 ZNF446Q9NWS9 450 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 TMEM216Q9P0N5 145 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 STOX2Q9P2F5 926 aaPredicted RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 EMCNQ9ULC0 261 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 PLCL2Q9UPR0 1127 aa7.31□□□□□ -1.24
YBX3-204ENST00000366290 PRRC2CQ9Y520 2896 aaKnown RBP7.31□□□□□ -1.24
YBX3-204ENST00000366290 UBXN8O00124 270 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 MAP2K7O14733 419 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 KLK8O60259 260 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 SRPX2O60687 465 aaPredicted RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 PROP1O75360 226 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 OR2B3O76000 313 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 GUCA1CO95843 209 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 SYF2O95926 243 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 CYP2A7P20853 494 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 MAGP20916 626 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 PSMB5P28074 263 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 CCR10P46092 362 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 AP1S2P56377 157 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 TUBA4AP68366 448 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 CDKL1Q00532 357 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.3□□□□□ -1.24
YBX3-204ENST00000366290 SRSF1Q07955 248 aaKnown RBP eCLIP7.3□□□□□ -1.24
YBX3-204ENST00000366290 ALKBH1Q13686 389 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 SEC23BQ15437 767 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 FAM83EQ2M2I3 478 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 RUNDC3AQ59EK9 446 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 LCN10Q6JVE6 187 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 FAM199XQ6PEV8 388 aaPredicted RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 FAM198BQ6UWH4 519 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 SYVN1Q86TM6 617 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 GPSM1Q86YR5 675 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 APLFQ8IW19 511 aaPredicted RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 KLHDC8AQ8IYD2 350 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 C4orf33Q8N1A6 199 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 BANPQ8N9N5 519 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 PPFIBP2Q8ND30 876 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 OR2L3Q8NG85 312 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 RHEBL1Q8TAI7 183 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 MCOLN3Q8TDD5 553 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 APOBEC4Q8WW27 367 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 SMPDL3AQ92484 453 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 RHBDF1Q96CC6 855 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 FBXL8Q96CD0 374 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 MPP4Q96JB8 637 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 CABS1Q96KC9 395 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 GBP5Q96PP8 586 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 C17orf62Q9BQA9 187 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 TMEM79Q9BSE2 394 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 HDHD5Q9BXW7 423 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 ACTL8Q9H568 366 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 CLMPQ9H6B4 373 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 TMBIM4Q9HC24 238 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 UTP6Q9NYH9 597 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 ANKMY1Q9P2S6 941 aa7.3□□□□□ -1.24
YBX3-204ENST00000366290 MRPS18BQ9Y676 258 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
YBX3-204ENST00000366290 DOCK10Q96BY6 2186 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 LRRK2Q5S007 2527 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 IGKV1-8A0A0C4DH67 115 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 OR2A25A4D2G3 310 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 A6NLC8 198 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 J3KRW8 73 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 PEX12O00623 359 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 DSCR3O14972 297 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 SLC28A2O43868 658 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 TYROBPO43914 113 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 CTSVO60911 334 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 KLF7O75840 302 aaPredicted RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 CD63P08962 238 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 TACR3P29371 465 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 GGT5P36269 586 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 SLC6A12P48065 614 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 ELLP55199 621 aaPredicted RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 TBPL1P62380 186 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 RPS15P62841 145 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 PRDX1Q06830 199 aaKnown RBP7.29□□□□□ -1.24
YBX3-204ENST00000366290 NAE1Q13564 534 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 NCF4Q15080 339 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 FBXO48Q5FWF7 155 aa7.29□□□□□ -1.24
YBX3-204ENST00000366290 TCTE1Q5JU00 501 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms