RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 STMN4Q9H169 189 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FOLH1BQ9HBA9 442 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MYNNQ9NPC7 610 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KCNN3Q9UGI6 736 aa12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
TNFRSF1A-202ENST00000366159 HRNRQ86YZ3 2850 aaPredicted RBP12.46□□□□□ -0.42
TNFRSF1A-202ENST00000366159 KIAA1549Q9HCM3 1950 aa12.46□□□□□ -0.42
TNFRSF1A-202ENST00000366159 A0A087WV62 115 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 HSPB2A8KAH6 182 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SYT5O00445 386 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ERN1O75460 977 aaKnown RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CBR3O75828 277 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 UROSP10746 265 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CPN1P15169 458 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PNLIPRP2P54317 469 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PSPHP78330 225 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PSG6Q00889 435 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C2orf80Q0P641 193 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PCLAFQ15004 111 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TESK1Q15569 626 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 HSPB2Q16082 182 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 WIPI1Q5MNZ9 446 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LIPMQ5VYY2 423 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ANGPTL8Q6UXH0 198 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 Q6ZSR9 355 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ADGRE4PQ86SQ3 457 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LACC1Q8IV20 430 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FAM9CQ8IZT9 166 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TNIP2Q8NFZ5 429 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ABTB1Q969K4 478 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TMCO6Q96DC7 493 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FCRL1Q96LA6 429 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR2B2Q9GZK3 357 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MKS1Q9NXB0 559 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C19orf53Q9UNZ5 99 aaPredicted RBP12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 L3MBTL1Q9Y468 752 aa12.45□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MBD3L4A6NDZ8 208 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MBD3L3A6NE82 208 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PRAMEF25A6NGN4 478 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MBD3L5A6NJ08 208 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 UPK1AO00322 258 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 COPEO14579 308 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 REM1O75628 298 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SLITRK5O94991 958 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ACTL6AO96019 429 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 IFI6P09912 130 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TACR1P25103 407 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZNF136P52737 540 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GFRA1P56159 465 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 WNT3P56703 355 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 IKBIPQ70UQ0 350 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C10orf107Q8IVU9 208 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 C4orf33Q8N1A6 199 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR2L13Q8N349 312 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MBD3L2Q8NHZ7 208 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZPLD1Q8TCW7 415 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 EGLN2Q96KS0 407 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ADOQ96SZ5 270 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SH3GL2Q99962 352 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GATA5Q9BWX5 397 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TUBB1Q9H4B7 451 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GLIPR2Q9H4G4 154 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CALHM2Q9HA72 323 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 RRAGDQ9NQL2 400 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PFDN4Q9NQP4 134 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 GIMAP4Q9NUV9 329 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TAS2R9Q9NYW1 312 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 KLRF1Q9NZS2 232 aa12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 MRPS18CQ9Y3D5 142 aaKnown RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 POLR3HQ9Y535 204 aaPredicted RBP12.44□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 TBX19O60806 448 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 JUNP05412 331 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 NUDT17P0C025 328 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 EFR3AQ14156 821 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SF3B4Q15427 424 aaKnown RBP eCLIP12.43□□□□□ -0.428e-10■■■□□ 18.7
TNFRSF1A-202ENST00000366159 IMPG1Q17R60 797 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 ERCC6LQ2NKX8 1250 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 UGT3A2Q3SY77 523 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CFAP157Q5JU67 520 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 CLEC6AQ6EIG7 209 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 LARP4Q71RC2 724 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 YRDCQ86U90 279 aaKnown RBP12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 PLCZ1Q86YW0 608 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 SLC44A2Q8IWA5 706 aaPredicted RBP12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 BANPQ8N9N5 519 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR2T11Q8NH01 316 aa12.43□□□□□ -0.42
TNFRSF1A-202ENST00000366159 OR2W6PQ8NHA6 318 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms