RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 RPS6KA1Q15418 735 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MAPKAPK3Q16644 382 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MEP1AQ16819 746 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TTLL9Q3SXZ7 439 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 SFT2D3Q587I9 215 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ANKRD22Q5VYY1 191 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF470Q6ECI4 717 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 KIAA0930Q6ICG6 404 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 H3F3CQ6NXT2 135 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF549Q6P9A3 640 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 PAPD4Q6PIY7 484 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CYHR1Q6ZMK1 362 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MBOAT1Q6ZNC8 495 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 PIWIL4Q7Z3Z4 852 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 GALNTL5Q7Z4T8 443 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CEP97Q8IW35 865 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 DENND6AQ8IWF6 608 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CPNE9Q8IYJ1 553 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 KIF2BQ8N4N8 673 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 RNF10Q8N5U6 811 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 SPC24Q8NBT2 197 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR5T3Q8NGG3 340 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MCOLN3Q8TDD5 553 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 BCAS4Q8TDM0 211 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TSLPQ969D9 159 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF354BQ96LW1 612 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 GPR21Q99679 349 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 EBNA1BP2Q99848 306 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 UTP23Q9BRU9 249 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRMOQ9BU70 441 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TSGA10Q9BZW7 698 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRIM2Q9C040 744 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ATG10Q9H0Y0 220 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCDC68Q9H2F9 335 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CDCP1Q9H5V8 836 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ANKHQ9HCJ1 492 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCDC177Q9NQR7 707 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 NECTIN3Q9NQS3 549 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TMEM184CQ9NVA4 438 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 INTS10Q9NVR2 710 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 C19orf25Q9UFG5 118 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF835Q9Y2P0 537 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MEMO1Q9Y316 297 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 UBE2J1Q9Y385 318 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 MED13LQ71F56 2210 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 F8P00451 2351 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM234BA2RU67 622 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 ASPDHA6ND91 283 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 GOLGA8MH3BSY2 632 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 NDC80O14777 642 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 ASNA1O43681 348 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZBTB14O43829 449 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 KIF5CO60282 957 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 LCMT2O60294 686 aaKnown RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 B4GALT2O60909 372 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 DNAJB6O75190 326 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 NEURL1O76050 574 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 MLYCDO95822 493 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 FGGP02679 453 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SERPIND1P05546 499 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SP1P08047 785 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 MPC1LP0DKB6 136 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CDH1P12830 882 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 ENO3P13929 434 aaPredicted RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 TFEBP19484 476 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 TPSB2P20231 275 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SSTR2P30874 369 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 RFC3P40938 356 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SKIV2L2P42285 1042 aaKnown RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SLC1A2P43004 574 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CPA2P48052 419 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 AGTR2P50052 363 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR4D2P58180 307 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SLC26A5P58743 744 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 TAS2R50P59544 299 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 RPS15AP62244 130 aaKnown RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CSNK1G2P78368 415 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 MPP1Q00013 466 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CDK16Q00536 496 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 RHAGQ02094 409 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 RELAQ04206 551 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 TLE4Q04727 773 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 NAE1Q13564 534 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 THOC5Q13769 683 aaKnown RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CSHL1Q14406 222 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 TPSAB1Q15661 275 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 NSDHLQ15738 373 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 EXT1Q16394 746 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 KRTCAP3Q53RY4 240 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM209BQ5JX69 171 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SLC25A25Q6KCM7 469 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 CAPN13Q6MZZ7 669 aaPredicted RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 C4orf22Q6V702 233 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 MEX3BQ6ZN04 569 aaKnown RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 Q6ZPB1 254 aaPredicted RBP4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 ASPGQ86U10 573 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 SLC26A11Q86WA9 606 aa4.81□□□□□ -1.64
RNU4-4P-201ENST00000364588 C17orf64Q86WR6 236 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms