RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MLLT11Q13015 90 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 NXNL2Q5VZ03 156 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF767PQ75MW2 155 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 TRMT10AQ8TBZ6 339 aaKnown RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SLC7A6Q92536 515 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 AK6Q9Y3D8 172 aaKnown RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 KLK8O60259 260 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 UGDHO60701 494 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 OR7A10O76100 309 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 KCNK2O95069 426 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 ARAFP10398 606 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 LHCGRP22888 699 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 GUCA1AP43080 201 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 HTR3AP46098 478 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 PFN3P60673 137 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 ADAM8P78325 824 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SIM1P81133 766 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-201ENST00000361866 IFITM3Q01628 133 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 MINDY4Q4G0A6 757 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 EIPR1Q53HC9 387 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CDKL4Q5MAI5 379 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 PIP5KL1Q5T9C9 394 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF627Q7L945 461 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 CXorf36Q9H7Y0 433 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 RP1P56715 2156 aa13.15□□□□□ -0.3
COL6A1-201ENST00000361866 B3GALT2O43825 422 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 SCG5P05408 212 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 KCNJ10P78508 379 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 NTHL1P78549 312 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 BAK1Q16611 211 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 METTL2BQ6P1Q9 378 aaKnown RBP13.15□□□□□ -0.31
COL6A1-201ENST00000361866 PTOV1Q86YD1 416 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 C10orf111Q8N326 155 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 MFSD4AQ8N468 514 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 CLSTN3Q9BQT9 956 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 ALOXE3Q9BYJ1 711 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 HOXD1Q9GZZ0 328 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 PDFQ9HBH1 243 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 FBXL3Q9UKT7 428 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 PADI2Q9Y2J8 665 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 KIF13BQ9NQT8 1826 aa13.15□□□□□ -0.31
COL6A1-201ENST00000361866 EIF3FO00303 357 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 CYBAP13498 195 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 GRK6P43250 576 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 VSX2P58304 361 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 DSC1Q08554 894 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 GALNTL5Q7Z4T8 443 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 RNF31Q96EP0 1072 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 COLEC10Q9Y6Z7 277 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 WASHC1A8K0Z3 465 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 FAM171A2A8MVW0 826 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 MCIDASD6RGH6 385 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 XKRYO14609 159 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 NARSO43776 548 aaKnown RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 NFATC1O95644 943 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 IL1AP01583 271 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 C1SP09871 688 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 HTRA3P83110 453 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 HSPA12BQ96MM6 686 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 RETREG1Q9H6L5 497 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ADH5P11766 374 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 C6P13671 934 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 TAS2R38P59533 333 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ZNF234Q14588 700 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 GATSQ8NAP1 163 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 TTLQ8NG68 377 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 OR4K13Q8NH42 304 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 WDR20Q8TBZ3 569 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ADAD1Q96M93 576 aaKnown RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 ALG8Q9BVK2 526 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 MKKSQ9NPJ1 570 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 CUEDC1Q9NWM3 386 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-201ENST00000361866 OR1A2Q9Y585 309 aa13.14□□□□□ -0.31
COL6A1-201ENST00000361866 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 FABP7O15540 132 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
COL6A1-201ENST00000361866 PLATP00750 562 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 GKN3PP0CG01 181 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 GNALP38405 381 aa13.13□□□□□ -0.31
COL6A1-201ENST00000361866 MC3RP41968 323 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms