RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LIMK1P53667 647 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 TAS2R50P59544 299 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SNTB2Q13425 540 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ALG1LQ6GMV1 187 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 C19orf48Q6RUI8 117 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 FAM198BQ6UWH4 519 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 TECPR1Q7Z6L1 1165 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 TMCO2Q7Z6W1 182 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 TRAPPC5Q8IUR0 188 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF687Q8N1G0 1237 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF578Q96N58 590 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SLC6A18Q96N87 628 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 EGLN3Q9H6Z9 239 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 H2AFY2Q9P0M6 372 aaPredicted RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ANGPT4Q9Y264 503 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ALPK2Q86TB3 2170 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 LALBAP00709 142 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SEMG1P04279 462 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SRPRAP08240 638 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 CBR1P16152 277 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SLC6A1P30531 599 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 PCGF2P35227 344 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 DSC1Q08554 894 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 GPRC6AQ5T6X5 926 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 MEDAGQ5VYS4 303 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SLC6A19Q695T7 634 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 THOC6Q86W42 341 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 CMTM8Q8IZV2 173 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 EXOSC8Q96B26 276 aaKnown RBP11.99□□□□□ -0.49
VAMP1-201ENST00000361716 NPAS1Q99742 590 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 CAPN10Q9HC96 672 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 ACTR10Q9NZ32 417 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 PLAGL1Q9UM63 463 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 FKBP7Q9Y680 259 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
VAMP1-201ENST00000361716 QSOX1O00391 747 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 PGRMC2O15173 223 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ETHE1O95571 254 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 IGSF6O95976 241 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 EGFP01133 1207 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 HLA-DPB1P04440 258 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 H1F0P07305 194 aaKnown RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SLC11A1P49279 550 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 EIF4EBP2Q13542 120 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 CAMK2DQ13557 499 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 KRT78Q8N1N4 520 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 OR4C15Q8NGM1 316 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF671Q8TAW3 534 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 PAWRQ96IZ0 340 aaKnown RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 UROC1Q96N76 676 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 NT5DC2Q9H857 520 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SLCO1C1Q9NYB5 712 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 CLEC4EQ9ULY5 219 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 TMEM202A6NGA9 273 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 M0R3H8 397 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 UCHL1P09936 223 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 JUPP14923 745 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SHC1P29353 583 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 BUD31P41223 144 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 PITPNBP48739 271 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 DGCR2P98153 550 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ETFDHQ16134 617 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SYT14P1Q58G82 188 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 Q6ZVU0 165 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 LAS2Q8IYD9 372 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 KIAA1143Q96AT1 154 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 CUEDC1Q9NWM3 386 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 FNIP2Q9P278 1114 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 TNFRSF10DQ9UBN6 386 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ERVK-19Q9WJR5 959 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ANXA2P2A6NMY6 339 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 PTX3P26022 381 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 MTNR1AP48039 350 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 RFX3P48380 749 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 VEGFCP49767 419 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 LIM2P55344 173 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 FAAP20Q6NZ36 180 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 DNAJB7Q7Z6W7 309 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 RTN4RL1Q86UN2 441 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SLC22A8Q8TCC7 542 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 TEX10Q9NXF1 929 aaPredicted RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 SEC14L3Q9UDX4 400 aa11.98□□□□□ -0.49
VAMP1-201ENST00000361716 RUVBL1Q9Y265 456 aaKnown RBP11.98□□□□□ -0.49
VAMP1-201ENST00000361716 GLOD5A6NK44 160 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 DUSP11O75319 330 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms