RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 UGT2B10P36537 528 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 BCAP31P51572 246 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ATP1A4Q13733 1029 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ELAVL3Q14576 367 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PLEKHN1Q494U1 663 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 EGFL6Q8IUX8 553 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SLC30A8Q8IWU4 369 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ADGRF3Q8IZF5 1079 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 LGI4Q8N135 537 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OR8D1Q8WZ84 308 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 RAD51AP1Q96B01 352 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 IL17FQ96PD4 163 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM245Q9H330 911 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CXorf36Q9H7Y0 433 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 KCND3Q9UK17 655 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ALPK3Q96L96 1907 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TCF20Q9UGU0 1960 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 DENND4AQ7Z401 1863 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KIF26AQ9ULI4 1882 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ANTXRLA6NF34 631 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PYCARD-AS1I3L0S3 204 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PLPP1O14494 284 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 IFNA14P01570 189 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 EN2P19622 333 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 CBLP22681 906 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 CTNNB1P35222 781 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TGFBR1P36897 503 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SERPINB10P48595 397 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 CD97P48960 835 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 RPA4Q13156 261 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 IRF3Q14653 427 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DUSP7Q16829 419 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM236Q5W0B7 351 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF770Q6IQ21 691 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 OR9Q2Q8NGE9 314 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 OR5AR1Q8NGP9 310 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PROX1Q92786 737 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 MYDGFQ969H8 173 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PDXPQ96GD0 296 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 RSPO3Q9BXY4 272 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 RMI1Q9H9A7 625 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SELENONQ9NZV5 590 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 WBP11Q9Y2W2 641 aaKnown RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ENPP4Q9Y6X5 453 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 NUP210Q8TEM1 1887 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 A0A1W2PPH5 198 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 EFCAB9A8MZ26 197 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DNPH1O43598 174 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SEMA3DO95025 777 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PORP16435 677 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KELP23276 732 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 BSGP35613 385 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 FRKP42685 505 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DSTNP60981 165 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 RELAQ04206 551 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 CYP2A13Q16696 494 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SAXO2Q658L1 398 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DNAJC5GQ8N7S2 189 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ANKRD53Q8N9V6 530 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PLA2G15Q8NCC3 412 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TM4SF18Q96CE8 201 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 NEURL3Q96EH8 262 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PPP1R16AQ96I34 528 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 NRTNQ99748 197 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ANKHQ9HCJ1 492 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ZDHHC4Q9NPG8 344 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SLC23A2Q9UGH3 650 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PLAGL1Q9UM63 463 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ANGPT4Q9Y264 503 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ASF1AQ9Y294 204 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 A0A1B0GVC2 190 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 A0A1W2PR48 441 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 FITM1A5D6W6 292 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 FFAR1O14842 300 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 FGBP02675 491 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 VIPR2P41587 438 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KIR2DL1P43626 348 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KIR2DL2P43627 348 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TUBA1BP68363 451 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 UBE3AQ05086 875 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ARHGAP19Q14CB8 494 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PTGES3Q15185 160 aaKnown RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 MAPK11Q15759 364 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DEPDC1Q5TB30 811 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 KHDRBS2Q5VWX1 349 aaKnown RBP6.88□□□□□ -1.31
CLCN3-202ENST00000360642 REEP3Q6NUK4 255 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 TUBA1AQ71U36 451 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 ADCK1Q86TW2 530 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 DCUN1D3Q8IWE4 304 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 SFTPA1Q8IWL2 248 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 NATD1Q8N6N6 113 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 NEURL2Q9BR09 285 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 MS4A8Q9BY19 250 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 PELI2Q9HAT8 420 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 A4GALTQ9NPC4 353 aa6.88□□□□□ -1.31
CLCN3-202ENST00000360642 LHX9Q9NQ69 397 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms