RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TRNT1Q96Q11 434 aaKnown RBP10.53□□□□□ -0.72
SSU72-202ENST00000359060 HDHD5Q9BXW7 423 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 IL21RQ9HBE5 538 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 OR6C2Q9NZP2 312 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 ADAM29Q9UKF5 820 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 HCN2Q9UL51 889 aa10.53□□□□□ -0.72
SSU72-202ENST00000359060 AGAP5A6NIR3 686 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 TNFP01375 233 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 MMP11P24347 488 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 SCN1BQ07699 218 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 SEC23BQ15437 767 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 MINDY4Q4G0A6 757 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 ARL9Q6T311 187 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 B3GLCTQ6Y288 498 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 CCDC71Q8IV32 467 aaPredicted RBP10.52□□□□□ -0.72
SSU72-202ENST00000359060 DYNC2LI1Q8TCX1 351 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 VWCEQ96DN2 955 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 FCRL1Q96LA6 429 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 CD180Q99467 661 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 PITHD1Q9GZP4 211 aaPredicted RBP10.52□□□□□ -0.72
SSU72-202ENST00000359060 SAP130Q9H0E3 1048 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 SMURF1Q9HCE7 757 aa10.52□□□□□ -0.72
SSU72-202ENST00000359060 AGR2O95994 175 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 PORP16435 677 aaPredicted RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 IGFALSP35858 605 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 SLC9A3P48764 834 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 TRA2BP62995 288 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 ILKQ13418 452 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 PUM1Q14671 1186 aaKnown RBP eCLIP10.52□□□□□ -0.73
SSU72-202ENST00000359060 RNASE12Q5GAN4 147 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 PGBD2Q6P3X8 592 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 TUBA3EQ6PEY2 450 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 CCBE1Q6UXH8 406 aaPredicted RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 KLHL36Q8N4N3 616 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 OR1E3Q8WZA6 343 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 OSTF1Q92882 214 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 YIPF6Q96EC8 236 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 ARSGQ96EG1 525 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 AHCYL2Q96HN2 611 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 PLA2G2FQ9BZM2 168 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 SERHL2Q9H4I8 314 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 WASH6PQ9NQA3 447 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 CNOT2Q9NZN8 540 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 ZNF624Q9P2J8 865 aaPredicted RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 CYP8B1Q9UNU6 501 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 BRCA2P51587 3418 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 FAM183AA6NL82 134 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 CHST10O43529 356 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 LILRB5O75023 590 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 CSF2P04141 144 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 MRPL3P09001 348 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 CBLP22681 906 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 PKLRP30613 574 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 DUSP6Q16828 381 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 UBE2UQ5VVX9 321 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 LAIR1Q6GTX8 287 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 LAIR2Q6ISS4 152 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 MZT2AQ6P582 158 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 KIAA0907Q7Z7F0 614 aaPredicted RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 WDR34Q96EX3 536 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 RSPH9Q9H1X1 276 aaPredicted RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 DDX31Q9H8H2 851 aaKnown RBP10.52□□□□□ -0.73
SSU72-202ENST00000359060 SLC6A14Q9UN76 642 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 ICKQ9UPZ9 632 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 PCDHGB6Q9Y5F9 930 aa10.52□□□□□ -0.73
SSU72-202ENST00000359060 LINC01565O15544 149 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 DYRK3O43781 588 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 CEACAM5P06731 702 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 AHRP35869 848 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 MRPL28Q13084 256 aaKnown RBP10.51□□□□□ -0.73
SSU72-202ENST00000359060 SHHQ15465 462 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 PAQR6Q6TCH4 344 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 ZNF793Q6ZN11 406 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 RAB43Q86YS6 212 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 LACC1Q8IV20 430 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 FKBP10Q96AY3 582 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 TBC1D20Q96BZ9 403 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 RNF31Q96EP0 1072 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 SAMD8Q96LT4 415 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 DMRTB1Q96MA1 342 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 NELL2Q99435 816 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 PINK1Q9BXM7 581 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
SSU72-202ENST00000359060 SLITRK5O94991 958 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 HNRNPA2B1P22626 353 aaKnown RBP10.51□□□□□ -0.73
SSU72-202ENST00000359060 SDC2P34741 201 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 OR2B6P58173 313 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 PPP2CBP62714 309 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 PPP2CAP67775 309 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 FAM111BQ6SJ93 734 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 PLET1Q6UQ28 207 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.51□□□□□ -0.73
SSU72-202ENST00000359060 CSNK1A1LQ8N752 337 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 C7orf57Q8NEG2 295 aa10.51□□□□□ -0.73
SSU72-202ENST00000359060 GPR32P1Q8NGA4 272 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms