RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 OR4K17Q8NGC6 315 aa13□□□□□ -0.33
VCP-201ENST00000358901 THRSPQ92748 146 aa13□□□□□ -0.33
VCP-201ENST00000358901 TEX37Q96LM6 180 aa13□□□□□ -0.33
VCP-201ENST00000358901 RNF121Q9H920 327 aa13□□□□□ -0.33
VCP-201ENST00000358901 TEX13DA0A0J9YY54 714 aaPredicted RBP13□□□□□ -0.33
VCP-201ENST00000358901 OR7A17O14581 309 aa13□□□□□ -0.33
VCP-201ENST00000358901 KLF8O95600 359 aaPredicted RBP13□□□□□ -0.33
VCP-201ENST00000358901 RNH1P13489 461 aaKnown RBP13□□□□□ -0.33
VCP-201ENST00000358901 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
VCP-201ENST00000358901 LEXMQ3ZCV2 418 aa13□□□□□ -0.33
VCP-201ENST00000358901 ARHGAP11AQ6P4F7 1023 aa13□□□□□ -0.33
VCP-201ENST00000358901 LIPIQ6XZB0 460 aa13□□□□□ -0.33
VCP-201ENST00000358901 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
VCP-201ENST00000358901 RIT1Q92963 219 aa13□□□□□ -0.33
VCP-201ENST00000358901 G6PC3Q9BUM1 346 aa13□□□□□ -0.33
VCP-201ENST00000358901 DPH1Q9BZG8 443 aa13□□□□□ -0.33
VCP-201ENST00000358901 CD300AQ9UGN4 299 aa13□□□□□ -0.33
VCP-201ENST00000358901 HNRNPA1P09651 372 aaKnown RBP eCLIP13□□□□□ -0.33
VCP-201ENST00000358901 PRKCAP17252 672 aa13□□□□□ -0.33
VCP-201ENST00000358901 ARNTP27540 789 aa13□□□□□ -0.33
VCP-201ENST00000358901 GPR143P51810 404 aa13□□□□□ -0.33
VCP-201ENST00000358901 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
VCP-201ENST00000358901 SHC2P98077 582 aa13□□□□□ -0.33
VCP-201ENST00000358901 FGFBP1Q14512 234 aa13□□□□□ -0.33
VCP-201ENST00000358901 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13□□□□□ -0.336e-7■■■■□ 26.5
VCP-201ENST00000358901 EOGTQ5NDL2 527 aa13□□□□□ -0.33
VCP-201ENST00000358901 C12orf40Q86WS4 652 aa13□□□□□ -0.33
VCP-201ENST00000358901 OR2L2Q8NH16 312 aa13□□□□□ -0.33
VCP-201ENST00000358901 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
VCP-201ENST00000358901 SMARCD2Q92925 531 aa13□□□□□ -0.33
VCP-201ENST00000358901 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
VCP-201ENST00000358901 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
VCP-201ENST00000358901 ACTRT3Q9BYD9 372 aa13□□□□□ -0.33
VCP-201ENST00000358901 ACTR6Q9GZN1 396 aa13□□□□□ -0.33
VCP-201ENST00000358901 TUBB1Q9H4B7 451 aa13□□□□□ -0.33
VCP-201ENST00000358901 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
VCP-201ENST00000358901 ZNF806P0C7X5 589 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 ASB15Q8WXK1 588 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 GGHQ92820 318 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 SCGB3A2Q96PL1 93 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 ATG5Q9H1Y0 275 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 LHX3Q9UBR4 397 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TMEM14AQ9Y6G1 99 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 SCO2O43819 266 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SCGB1D2O95969 90 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 MAGEA12P43365 314 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TMEM207Q6UWW9 146 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 MFSD6LQ8IWD5 586 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TMEM184CQ9NVA4 438 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 LRRTM2O43300 516 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 RP2O75695 350 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 CTSAP10619 480 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TNFSF8P32971 234 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 MPP7Q5T2T1 576 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SBSNQ6UWP8 590 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 RFLNAQ6ZTI6 216 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 GPAT4Q86UL3 456 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 AVL9Q8NBF6 648 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 FOXJ1Q92949 421 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 CHFRQ96EP1 664 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 ZNF486Q96H40 463 aaPredicted RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 GPR78Q96P69 363 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 CNN2Q99439 309 aaKnown RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 SLC46A2Q9BY10 475 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 POTEKPQ9BYX7 375 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 CLEC4EQ9ULY5 219 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 PCDHGB2Q9Y5G2 931 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TEX13CA0A0J9YWL9 993 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 A0A1W2PQ09 198 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 HTR3EA5X5Y0 456 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 DISC1C4P0D8 188 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 HHLA1C9JL84 531 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 J3KTA2 159 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 CREBL2O60519 120 aaPredicted RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 APOC1P02654 83 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 KLKB1P03952 638 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 PIM1P11309 404 aaPredicted RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 CERS1P27544 350 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 ACTA2P62736 377 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 ACTG2P63267 376 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SGCBQ16585 318 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 TMEM156Q8N614 296 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 METTL2AQ96IZ6 378 aaKnown RBP12.99□□□□□ -0.33
VCP-201ENST00000358901 CMKLR1Q99788 373 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 SLC17A9Q9BYT1 436 aa12.99□□□□□ -0.33
VCP-201ENST00000358901 METTL7AQ9H8H3 244 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms