RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 ATP6V1G1O75348 118 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 REM1O75628 298 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 GIPRP48546 466 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 CBX3Q13185 183 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 IDNKQ5T6J7 187 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 XAF1Q6GPH4 301 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 USP53Q70EK8 1073 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ZNF367Q7RTV3 350 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 LINC01555Q8NAE3 123 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 OR2L8Q8NGY9 312 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 C7orf34Q96L11 122 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ACTRT3Q9BYD9 372 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 DPH1Q9BZG8 443 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 OR8D2Q9GZM6 311 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 CLEC2DQ9UHP7 191 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 CAB39Q9Y376 341 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SCN2AQ99250 2005 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 J3QLW9 94 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 HMGN4O00479 90 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 CPNE6O95741 557 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ZNF19P17023 458 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 LRIT3Q3SXY7 679 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 DCDC5Q6ZRR9 648 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 AP3S1Q92572 193 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 GFM1Q96RP9 751 aaKnown RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SLC30A2Q9BRI3 323 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ADAM30Q9UKF2 790 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 MED31Q9Y3C7 131 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 TSC2P49815 1807 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 A0A0A6YYC8 382 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 I3L1I5 382 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 RAB36O95755 333 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 IFNGP01579 166 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 HIST1H2ABP04908 130 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 BMP8BP34820 402 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 MTNR1AP48039 350 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ZNF91Q05481 1191 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 TCTN3Q6NUS6 607 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SLC36A4Q6YBV0 504 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 HIST3H2AQ7L7L0 130 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 BMP8AQ7Z5Y6 402 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 DRAXINQ8NBI3 349 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 HIST1H2ACQ93077 130 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 VMP1Q96GC9 406 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SAMD8Q96LT4 415 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 TGM7Q96PF1 710 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 DUSP21Q9H596 190 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ACSS1Q9NUB1 689 aaPredicted RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 KCMF1Q9P0J7 381 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 USP36Q9P275 1121 aaKnown RBP13.4□□□□□ -0.26
SIRPA-202ENST00000358771 ZNF639Q9UID6 485 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 SLC7A7Q9UM01 511 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
SIRPA-202ENST00000358771 A0A0G2JPF8 293 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 FAM240BA0A1B0GVZ2 78 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 HNRNPCL3B7ZW38 293 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 ARHGEF9O43307 516 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 CAPNS1P04632 268 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 HMGN1P05114 100 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 CEACAM5P06731 702 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 HNRNPCL4P0DMR1 293 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 F3P13726 295 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 ELAVL4P26378 380 aaKnown RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 IKZF2Q9UKS7 526 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 NTNG1Q9Y2I2 539 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 KLHL33A6NCF5 533 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 A8MV72 311 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 OR6A2O95222 327 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 MYL9P24844 172 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 GPR18Q14330 331 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 PLET1Q6UQ28 207 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 OR5T3Q8NGG3 340 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 GNPDA2Q8TDQ7 276 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 MS4A6EQ96DS6 147 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 TOE1Q96GM8 510 aaKnown RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 DGAT2Q96PD7 388 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 TRNT1Q96Q11 434 aaKnown RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 NAALAD2Q9Y3Q0 740 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 FCMRO60667 390 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 SOX30O94993 753 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 PAPLNO95428 1278 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 IDUAP35475 653 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 XCR1P46094 333 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 KCNJ5P48544 419 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 POU6F2P78424 691 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-202ENST00000358771 NLRP8Q86W28 1048 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 KLHL36Q8N4N3 616 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 TMEM165Q9HC07 324 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 CA14Q9ULX7 337 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 UNC13CQ8NB66 2214 aa13.39□□□□□ -0.27
SIRPA-202ENST00000358771 LAMA2P24043 3122 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms