RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TPRG1Q6ZUI0 275 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 OR52N1Q8NH53 320 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GNG8Q9UK08 70 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 VEGFDO43915 354 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GP2P55259 537 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLBPQ14493 270 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TAC4Q86UU9 113 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CIR1Q86X95 450 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PYROXD2Q8N2H3 581 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TRAM1L1Q8N609 369 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ZMIZ2Q8NF64 920 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CD300AQ9UGN4 299 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DLGAP4Q9Y2H0 992 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TIMM22Q9Y584 194 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RAF1P04049 648 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GP1BBP13224 206 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC6A9P48067 706 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 FAPQ12884 760 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SCGB2B2Q4G0G5 96 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ARMC5Q96C12 935 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ARHGAP39Q9C0H5 1083 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PELI2Q9HAT8 420 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC6A14Q9UN76 642 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 EMC8O43402 210 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ICMTO60725 284 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 FARS2O95363 451 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SCG5P05408 212 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CD48P09326 243 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RPS15AP62244 130 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SF1Q15637 639 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 LARP4Q71RC2 724 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SERINC5Q86VE9 423 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DBF4BQ8NFT6 615 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC5A7Q9GZV3 580 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 NSUN3Q9H649 340 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PTGES2Q9H7Z7 377 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ARL5AQ9Y689 179 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 OR2T1O43869 369 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 AMD1P17707 334 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 WDR5P61964 334 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ECM1Q16610 540 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 LRRC26Q2I0M4 334 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 LNX2Q8N448 690 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF461Q8TAF7 563 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 OR52A5Q9H2C5 316 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CWH43Q9H720 699 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CSTBP04080 98 aaKnown RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CPT2P23786 658 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RAPSNQ13702 412 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 HNF4GQ14541 408 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PON2Q15165 354 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ESX1Q8N693 406 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 C12orf29Q8N999 325 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 MAL2Q969L2 176 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 HMCESQ96FZ2 354 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC22A12Q96S37 553 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 IL12RB2Q99665 862 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM175Q9BSA9 504 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PINK1Q9BXM7 581 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 THSD1Q9NS62 852 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 PIGVQ9NUD9 493 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 POMT1Q9Y6A1 747 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 TRBV2A0A0J9YWF9 115 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 AQP9O43315 295 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 COL13A1Q5TAT6 717 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 H3F3CQ6NXT2 135 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC30A6Q6NXT4 461 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 NRROSQ86YC3 692 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SGPP2Q8IWX5 399 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 DTWD1Q8N5C7 304 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 KLHL15Q96M94 604 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 BEST1O76090 585 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 GAAP10253 952 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SPI1P17947 270 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CALCRP30988 508 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ABCG1P45844 678 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 CAMLGP49069 296 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SCAND1P57086 179 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 SLC2A7Q6PXP3 512 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 OTOP3Q7RTS5 596 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 RDH10Q8IZV5 341 aa6.26□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF275Q9NSD4 429 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-202ENST00000357162 A0A1W2PQ09 198 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 TVP23AA6NH52 213 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 HAS3O00219 553 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 ARPC5O15511 151 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 LGI1O95970 557 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CCR7P32248 378 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 CERS5Q8N5B7 392 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 OR5H2Q8NGV7 314 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 UBTD2Q8WUN7 234 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SORCS1Q8WY21 1168 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PRRC1Q96M27 445 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 NIPSNAP3BQ9BS92 247 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 SRMSQ9H3Y6 488 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 PMS2P2O95744 297 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 KLRK1P26718 216 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 DCTP40126 519 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 HSPB3Q12988 150 aa6.25□□□□□ -1.41
VPS13B-202ENST00000357162 LRP8Q14114 963 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms