RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CDCP1Q9H5V8 836 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 KAT8Q9H7Z6 458 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 DDX18Q9NVP1 670 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 MYOTQ9UBF9 498 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 GPR55Q9Y2T6 319 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 CHST2Q9Y4C5 530 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MAP1AP78559 2803 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 FREM3P0C091 2139 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CELSR2Q9HCU4 2923 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNHIT1O43257 154 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 DNAJA2O60884 412 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TNFRSF21O75509 655 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 DCTN3O75935 186 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 OR6B1O95007 311 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FAM87AP0C7U9 286 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 GABRA3P34903 492 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SOAT1P35610 550 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RFX3P48380 749 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MS4A2Q01362 244 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NFYCQ13952 458 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CEACAM7Q14002 265 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 KRT72Q14CN4 511 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RGNQ15493 299 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CYP27C1Q4G0S4 372 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RPS26P11Q5JNZ5 115 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 H3F3CQ6NXT2 135 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FAM9CQ8IZT9 166 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 GALNT16Q8N428 558 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 VPS37AQ8NEZ2 397 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 JADE3Q92613 823 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 HOXB13Q92826 284 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 EFHD2Q96C19 240 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 NEURL3Q96EH8 262 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NSL1Q96IY1 281 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CPPED1Q9BRF8 314 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 SLC25A23Q9BV35 468 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 WWTR1Q9GZV5 400 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PCDHAC1Q9H158 963 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FOLH1BQ9HBA9 442 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PROK2Q9HC23 129 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ATAD3AQ9NVI7 634 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TAGLN3Q9UI15 199 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 HEATR5AQ86XA9 2040 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 USP9XQ93008 2570 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 A0A096LPI6 279 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 A0A0G2JMM0 328 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 A0A1W2PPB8 328 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 A0A1W2PRS3 328 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 KIR3DP1A8MWS1 328 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 G3V3Y1 287 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ANGPT2O15123 496 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 EMC8O43402 210 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ITGA10O75578 1167 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 EPPINO95925 133 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 TCN1P20061 433 aaPredicted RBP3.71□□□□□ -1.81
LIG4-201ENST00000356922 MATN1P21941 496 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ABCD3P28288 659 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 NTSP30990 170 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 GSTM5P46439 218 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 SLC7A2P52569 658 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 FBXW4P57775 412 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 FOXK1P85037 733 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 HSDL2Q6YN16 418 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 IFNEQ86WN2 208 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 SLC44A2Q8IWA5 706 aaPredicted RBP3.71□□□□□ -1.81
LIG4-201ENST00000356922 ANKFN1Q8N957 763 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 EXD3Q8N9H8 876 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 MORN4Q8NDC4 146 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ADAMTS18Q8TE60 1221 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 SLC38A5Q8WUX1 472 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 XAGE5Q8WWM1 108 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 DAZLQ92904 295 aaKnown RBP3.71□□□□□ -1.81
LIG4-201ENST00000356922 TMBIM1Q969X1 311 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 NACC2Q96BF6 587 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ABHD17AQ96GS6 310 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 MS4A3Q96HJ5 214 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 ITCHQ96J02 903 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 OR7D2Q96RA2 312 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 RASL10BQ96S79 203 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 CDRT15Q96T59 188 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 NPAS1Q99742 590 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 TUBB6Q9BUF5 446 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 OR51I1Q9H343 314 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 MMP25Q9NPA2 562 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 LEF1Q9UJU2 399 aaPredicted RBP3.71□□□□□ -1.81
LIG4-201ENST00000356922 MKLN1Q9UL63 735 aa3.71□□□□□ -1.81
LIG4-201ENST00000356922 A0A087WV62 115 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 C2orf92A0A1B0GVN3 265 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 A8MVJ9 347 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 UGT2B11O75310 529 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ERN1O75460 977 aaKnown RBP3.71□□□□□ -1.82
LIG4-201ENST00000356922 WDPCPO95876 746 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 HPP00738 406 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 CHRM4P08173 479 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 TFPTP0C1Z6 253 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 ZCCHC18P0CG32 403 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 NCK1P16333 377 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 GPX2P18283 190 aa3.71□□□□□ -1.82
LIG4-201ENST00000356922 UQCRC2P22695 453 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms