RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCR6P51684 374 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SF3A2Q15428 464 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 C3orf38Q5JPI3 329 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 HENMT1Q5T8I9 393 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC27A4Q6P1M0 643 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC36A4Q6YBV0 504 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF767PQ75MW2 155 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ANKRD53Q8N9V6 530 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SPERTQ8NA61 448 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PCSK9Q8NBP7 692 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF680Q8NEM1 530 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CEP76Q8TAP6 659 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PIGKQ92643 395 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PRAP1Q96NZ9 151 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 THAP7Q9BT49 309 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 EFCAB11Q9BUY7 163 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TRMT61BQ9BVS5 477 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PAK6Q9NQU5 681 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF224Q9NZL3 707 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 KCNN3Q9UGI6 736 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ASF1AQ9Y294 204 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PCDHGB7Q9Y5F8 929 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PITPNM1O00562 1244 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PROM1O43490 865 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 MMP20O60882 483 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC43A1O75387 559 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC22A5O76082 557 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PDGFAP04085 211 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RPLP2P05387 115 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RB1P06400 928 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CTSLP07711 333 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CHRM4P08173 479 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ACP5P13686 325 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TIMP2P16035 220 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 AHRP35869 848 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF81P51508 661 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC16A1P53985 500 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 EPHB3P54753 998 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TAS2R41P59536 307 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 DCDC1P59894 354 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CDK5Q00535 292 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZSWIM7Q19AV6 140 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZBTB37Q5TC79 503 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TMEM215Q68D42 235 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 VASNQ6EMK4 673 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RASGRP3Q8IV61 690 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TBC1D19Q8N5T2 526 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 MORN4Q8NDC4 146 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 OR4Q3Q8NH05 313 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 HSD17B8Q92506 261 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ABHD1Q96SE0 405 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF607Q96SK3 696 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SOSTQ9BQB4 213 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SYT17Q9BSW7 474 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZSCAN5AQ9BUG6 496 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZDHHC4Q9NPG8 344 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 STARD7Q9NQZ5 370 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 SLC25A13Q9UJS0 675 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 INSL5Q9Y5Q6 135 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 AP1M2Q9Y6Q5 423 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 FRMPD3Q5JV73 1810 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 KPNA3O00505 521 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PIP5K1CO60331 668 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RFPL3O75679 317 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ABLIM3O94929 683 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ELFN1P0C7U0 828 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 DDCP20711 480 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 VIPR1P32241 457 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 PER3P56645 1201 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CLDN2P57739 230 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 VSX2P58304 361 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF33BQ06732 778 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ADAM15Q13444 863 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 NTRK2Q16620 822 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 CDONQ4KMG0 1287 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TIGD3Q6B0B8 471 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 FCRLBQ6BAA4 426 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ARL9Q6T311 187 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 RNF180Q86T96 592 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 VRK2Q86Y07 508 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 IZUMO1Q8IYV9 350 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 LRRC17Q8N6Y2 441 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 OR9A1PQ8NGU1 263 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 GCDHQ92947 438 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-203ENST00000356147 HYLS1Q96M11 299 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 HS3ST2Q9Y278 367 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 KIAA1671Q9BY89 1806 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 LEFTY2O00292 366 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 FOXE1O00358 373 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 STK25O00506 426 aa9.52□□□□□ -0.89
PTPRA-203ENST00000356147 CFDP00746 253 aaPredicted RBP9.52□□□□□ -0.89
PTPRA-203ENST00000356147 MRPL3P09001 348 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms