RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ELK4P28324 431 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 VIPR2P41587 438 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 CLCN2P51788 898 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 GRIN2CQ14957 1233 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TMEM236Q5W0B7 351 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 STT3BQ8TCJ2 826 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ATOH1Q92858 354 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 ITFG2Q969R8 447 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 DPH7Q9BTV6 452 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 REEP4Q9H6H4 257 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PLEK2Q9NYT0 353 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 INSL5Q9Y5Q6 135 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 GXYLT2A0PJZ3 443 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 CNIH1O95406 144 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 CLIC3O95833 236 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 AMY2AP04746 511 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 BMP6P22004 513 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 FABP6P51161 128 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 DEFB133Q30KQ1 61 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 WDR92Q96MX6 357 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 FBXO43Q4G163 708 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 LIN52Q52LA3 116 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 MANEAQ5SRI9 462 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 KIAA1614Q5VZ46 1190 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 KLHDC10Q6PID8 442 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 SCCPDHQ8NBX0 429 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 MCTS1Q9ULC4 181 aaKnown RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 TMED5Q9Y3A6 229 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 RRP8O43159 456 aaKnown RBP16.43■□□□□ 0.22
COL27A1-201ENST00000356083 LIPCP11150 499 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 CDKN2CP42773 168 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PITPNBP48739 271 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 GDF10P55107 478 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 KRTCAP2Q8N6L1 136 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 RPS10P5Q9NQ39 176 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 PISDQ9UG56 409 aa16.43■□□□□ 0.22
COL27A1-201ENST00000356083 UQCRC2P22695 453 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 CATSPEREQ5SY80 951 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 PPA2Q9H2U2 334 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 SH2D7A6NKC9 451 aaPredicted RBP16.42■□□□□ 0.22
COL27A1-201ENST00000356083 SLC18A1P54219 525 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 RPS18P62269 152 aaKnown RBP16.42■□□□□ 0.22
COL27A1-201ENST00000356083 CNPY1Q3B7I2 92 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 SLC27A4Q6P1M0 643 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 UGT2A3Q6UWM9 527 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 IL20RBQ6UXL0 311 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 IL17FQ96PD4 163 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 PIGVQ9NUD9 493 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 TMEM9Q9P0T7 183 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 GPR52Q9Y2T5 361 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 BTBD17A6NE02 478 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 C1orf196B1AJZ1 125 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 NXPH3O95157 252 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 HK3P52790 923 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 HES5Q5TA89 166 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 IL17RDQ8NFM7 739 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 OR4K3Q96R72 315 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 RNF6Q9Y252 685 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 GNB1P62873 340 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 OR7A5Q15622 319 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 TMEM205Q6UW68 189 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 OR52P1PQ8NH57 321 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 PPP1R35Q8TAP8 253 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 NTAN1Q96AB6 310 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 MAELQ96JY0 434 aaKnown RBP16.42■□□□□ 0.22
COL27A1-201ENST00000356083 KIAA0355O15063 1070 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 APOA2P02652 100 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 CES4AQ5XG92 561 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 RPLP0P6Q8NHW5 317 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 WIF1Q9Y5W5 379 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 NPFFR2Q9Y5X5 522 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 IQGAP3Q86VI3 1631 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 PPRC1Q5VV67 1664 aaKnown RBP16.42■□□□□ 0.22
COL27A1-201ENST00000356083 FBXO45P0C2W1 286 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 CD34P28906 385 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 SCML2Q9UQR0 700 aa16.42■□□□□ 0.22
COL27A1-201ENST00000356083 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 PMM2O15305 246 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 MPIG6BO95866 241 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 GCGRP47871 477 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SCAMP4Q969E2 229 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 CASD1Q96PB1 797 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 TSGA13Q96PP4 275 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ACKR4Q9NPB9 350 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 COQ3Q9NZJ6 369 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 GPR160Q9UJ42 338 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF891A8MT65 544 aaPredicted RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 RPL35P42766 123 aaKnown RBP16.41■□□□□ 0.22
COL27A1-201ENST00000356083 DNAJB8Q8NHS0 232 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ZNF566Q969W8 418 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 HES7Q9BYE0 225 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 ARL2P36404 184 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 HS6ST2Q96MM7 605 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 LPAR4Q99677 370 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 SLC7A8Q9UHI5 535 aa16.41■□□□□ 0.22
COL27A1-201ENST00000356083 CSF2RAP15509 400 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms