RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NKX2-2O95096 273 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-201ENST00000356017 AGR2O95994 175 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 COX4I1P13073 169 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 PPIBP23284 216 aaKnown RBP14.35□□□□□ -0.11
TRIM13-201ENST00000356017 GABRA3P34903 492 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 KRT20P35900 424 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 CD96P40200 585 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 SOX3P41225 446 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 PSMD4P55036 377 aaKnown RBP14.35□□□□□ -0.11
TRIM13-201ENST00000356017 PLCXD2Q0VAA5 305 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 TUBA3CQ13748 450 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 NNATQ16517 81 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 EXOSC6Q5RKV6 272 aaKnown RBP14.35□□□□□ -0.11
TRIM13-201ENST00000356017 FAM91A1Q658Y4 838 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 TUBA3EQ6PEY2 450 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 RETREG3Q86VR2 466 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 SLC34A3Q8N130 599 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 CLEC4FQ8N1N0 589 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 EXD3Q8N9H8 876 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 LSM14AQ8ND56 463 aaKnown RBP14.35□□□□□ -0.11
TRIM13-201ENST00000356017 SGCZQ96LD1 299 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 PIGUQ9H490 435 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 RAD21L1Q9H4I0 556 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 SLC6A13Q9NSD5 602 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 LRFN1Q9P244 771 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 CBLCQ9ULV8 474 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 USP24Q9UPU5 2620 aa14.35□□□□□ -0.11
TRIM13-201ENST00000356017 FBP2O00757 339 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 ASNA1O43681 348 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 ABCB7O75027 752 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 FBXO45P0C2W1 286 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 ABCD3P28288 659 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 NFYCQ13952 458 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 DECR1Q16698 335 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 IL20RBQ6UXL0 311 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 DLEU7Q6UYE1 221 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 NPSR1Q6W5P4 371 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 WDR53Q7Z5U6 358 aaPredicted RBP14.34□□□□□ -0.11
TRIM13-201ENST00000356017 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 SPACA9Q96E40 222 aaPredicted RBP14.34□□□□□ -0.11
TRIM13-201ENST00000356017 YIPF4Q9BSR8 244 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRIM13-201ENST00000356017 GID8Q9NWU2 228 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 ANKRD10Q9NXR5 420 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 PLA2G3Q9NZ20 509 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 SLAMF8Q9P0V8 285 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 MAP10Q9P2G4 905 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 CORO2BQ9UQ03 480 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 GMEB1Q9Y692 573 aa14.34□□□□□ -0.11
TRIM13-201ENST00000356017 DSPP15924 2871 aaKnown RBP14.34□□□□□ -0.11
TRIM13-201ENST00000356017 CLIC1O00299 241 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 MRASO14807 208 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 ZNF354AO60765 605 aaPredicted RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 OR6B1O95007 311 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 PDGFAP04085 211 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 ACP2P11117 423 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 HOXB9P17482 250 aaPredicted RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 PIGAP37287 484 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 MAN2A2P49641 1150 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 KHKP50053 298 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 TNFSF10P50591 281 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 MRPS22P82650 360 aaKnown RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 OR1C1Q15619 314 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 DUSP5Q16690 384 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 TRMT5Q32P41 509 aaKnown RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 ZNF791Q3KP31 576 aaPredicted RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 REP15Q6BDI9 236 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 RTL4Q6ZR62 310 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 RNF130Q86XS8 419 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 TREML1Q86YW5 311 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 COX18Q8N8Q8 333 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 GOLM1Q8NBJ4 401 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 OMA1Q96E52 524 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 EFCAB1Q9HAE3 211 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 ZNF71Q9NQZ8 489 aaPredicted RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 EXD2Q9NVH0 621 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 THUMPD1Q9NXG2 353 aaKnown RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 SLC25A37Q9NYZ2 338 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 VAPAQ9P0L0 249 aa14.33□□□□□ -0.11
TRIM13-201ENST00000356017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.33□□□□□ -0.11
TRIM13-201ENST00000356017 DOCK10Q96BY6 2186 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 TRAV17A0A0B4J275 112 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 EVPLLA8MZ36 301 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 K7EM74 188 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 TP53I11O14683 189 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 REM1O75628 298 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 PPM1BO75688 479 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 AK1P00568 194 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 IL12BP29460 328 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 PNLIPRP2P54317 469 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 RPS26P62854 115 aaKnown RBP14.33□□□□□ -0.12
TRIM13-201ENST00000356017 RPP38P78345 283 aaKnown RBP14.33□□□□□ -0.12
TRIM13-201ENST00000356017 POU6F2P78424 691 aaPredicted RBP14.33□□□□□ -0.12
TRIM13-201ENST00000356017 FADDQ13158 208 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 NTRK2Q16620 822 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 GTDC1Q4AE62 458 aa14.33□□□□□ -0.12
TRIM13-201ENST00000356017 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms