RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ZNF615Q8N8J6 731 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 COX18Q8N8Q8 333 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 TMEM102Q8N9M5 508 aaPredicted RBP14.51□□□□□ -0.09
CTSA-202ENST00000354880 C16orf52Q8NHV5 167 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 SLC2A12Q8TD20 617 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 GPR151Q8TDV0 419 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 NRG4Q8WWG1 115 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 METTL21AQ8WXB1 218 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 VSTM2LQ96N03 204 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 LMF2Q9BU23 707 aaKnown RBP14.51□□□□□ -0.09
CTSA-202ENST00000354880 BTBD2Q9BX70 525 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 OR8D2Q9GZM6 311 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 C3orf18Q9UK00 162 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 SATB2Q9UPW6 733 aa14.51□□□□□ -0.09
CTSA-202ENST00000354880 CNOT1A5YKK6 2376 aaKnown RBP14.51□□□□□ -0.09
CTSA-202ENST00000354880 CASQ2O14958 399 aaPredicted RBP14.5□□□□□ -0.09
CTSA-202ENST00000354880 SERPINB7O75635 380 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 NKX2-2O95096 273 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 CLPSP04118 112 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 CYC1P08574 325 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 ETS2P15036 469 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 PSG6Q00889 435 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 TRIP10Q15642 601 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 ARHGAP11BQ3KRB8 267 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 C3orf38Q5JPI3 329 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 TMEM164Q5U3C3 297 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 HMBOX1Q6NT76 420 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 FAM198BQ6UWH4 519 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SMYD1Q8NB12 490 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 ART5Q96L15 291 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 COL21A1Q96P44 957 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 CRB3Q9BUF7 120 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SLC38A1Q9H2H9 487 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 AGPAT4Q9NRZ5 378 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 PRODH2Q9UF12 536 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 DTX4Q9Y2E6 619 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 PCDHGA3Q9Y5H0 932 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 GPC6Q9Y625 555 aaPredicted RBP14.5□□□□□ -0.09
CTSA-202ENST00000354880 C9orf172C9J069 976 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 MFN2O95140 757 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 DDAH2O95865 285 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 AK1P00568 194 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SEMG1P04279 462 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 IGKV3-11P04433 115 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 GABRA3P34903 492 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 MAGEA2P43356 314 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SLC37A1P57057 533 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 OLIG3Q7RTU3 272 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 ANKRD37Q7Z713 158 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 AMIGO2Q86SJ2 522 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 ARMC8Q8IUR7 673 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 CHDHQ8NE62 594 aaPredicted RBP14.5□□□□□ -0.09
CTSA-202ENST00000354880 ZNF721Q8TF20 911 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 RASSF5Q8WWW0 418 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 PIK3R3Q92569 461 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SDF2Q99470 211 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SPATA5L1Q9BVQ7 753 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SEMA6AQ9H2E6 1030 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 IL1RAPQ9NPH3 570 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 SEC14L3Q9UDX4 400 aa14.5□□□□□ -0.09
CTSA-202ENST00000354880 FAM149AA5PLN7 773 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 VHLP40337 213 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 POU6F2P78424 691 aaPredicted RBP14.49□□□□□ -0.09
CTSA-202ENST00000354880 KCNJ10P78508 379 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 CHRNEQ04844 493 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 NCF4Q15080 339 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 ATP6AP1Q15904 470 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 DUSP7Q16829 419 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 SFT2D3Q587I9 215 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 DCST2Q5T1A1 773 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 C6orf15Q6UXA7 325 aaPredicted RBP14.49□□□□□ -0.09
CTSA-202ENST00000354880 ZDHHC21Q8IVQ6 265 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 ZNF321PQ8N8H1 164 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 MORN4Q8NDC4 146 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 SLC46A1Q96NT5 459 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 PADI1Q9ULC6 663 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 CFL2Q9Y281 166 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 DSPPQ9NZW4 1301 aa14.49□□□□□ -0.09
CTSA-202ENST00000354880 TTC36A6NLP5 189 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 DLL1O00548 723 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 TM4SF5O14894 197 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 FCMRO60667 390 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 DEAF1O75398 565 aaPredicted RBP14.48□□□□□ -0.09
CTSA-202ENST00000354880 DLGAP3O95886 979 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 LDLRP01130 860 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 CCNYL3P0C7X3 344 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 CEACAM1P13688 526 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 PEX2P28328 305 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 TARDBPQ13148 414 aaKnown RBP eCLIP14.48□□□□□ -0.09
CTSA-202ENST00000354880 IFI44LQ53G44 452 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 LPCAT4Q643R3 524 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 FRRS1Q6ZNA5 592 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 CACTIN-AS1Q8N1I8 211 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 OR1N1Q8NGS0 311 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 SPPL2AQ8TCT8 520 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 CENPNQ96H22 339 aaPredicted RBP14.48□□□□□ -0.09
CTSA-202ENST00000354880 SPRY4Q9C004 299 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 ZNF350Q9GZX5 532 aa14.48□□□□□ -0.09
CTSA-202ENST00000354880 COPS7AQ9UBW8 275 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms