RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CDH16O75309 829 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 CBR3O75828 277 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 URI1O94763 535 aaPredicted RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 PTX3P26022 381 aaPredicted RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 TLX1P31314 330 aaPredicted RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 PIK3CGP48736 1102 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 SERPINB8P50452 374 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 RAP1GDS1P52306 607 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 GFRA1P56159 465 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 PHEXP78562 749 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 DDX39BQ13838 428 aaKnown RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 WHAMMP3Q1A5X7 153 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 SPRED3Q2MJR0 410 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 C6orf52Q5T4I8 152 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 ALKBH2Q6NS38 261 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 AAGABQ6PD74 315 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 MYLK4Q86YV6 388 aaPredicted RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 RELL1Q8IUW5 271 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 OR2B2Q9GZK3 357 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 OR51B5Q9H339 312 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 ACSS3Q9H6R3 686 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 EXO1Q9UQ84 846 aaKnown RBP14.3□□□□□ -0.12
DDX55-202ENST00000354291 DTX4Q9Y2E6 619 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 SVEP1Q4LDE5 3571 aa14.3□□□□□ -0.12
DDX55-202ENST00000354291 H0YIV9 168 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 OVOL3O00110 214 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 GPR75O95800 540 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 ALDOAP04075 364 aaKnown RBP14.29□□□□□ -0.12
DDX55-202ENST00000354291 ABCB1P08183 1280 aaPredicted RBP14.29□□□□□ -0.12
DDX55-202ENST00000354291 ABCD3P28288 659 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 CLDN18P56856 261 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 SLC30A6Q6NXT4 461 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 GPR180Q86V85 440 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 ZCCHC7Q8N3Z6 543 aaKnown RBP14.29□□□□□ -0.12
DDX55-202ENST00000354291 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 SFXN2Q96NB2 322 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 MTERF1Q99551 399 aaKnown RBP14.29□□□□□ -0.12
DDX55-202ENST00000354291 PELOQ9BRX2 385 aaKnown RBP14.29□□□□□ -0.12
DDX55-202ENST00000354291 IPPKQ9H8X2 491 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 NINJ2Q9NZG7 142 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 KLRF1Q9NZS2 232 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 PHF11Q9UIL8 331 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 LIPT1Q9Y234 373 aa14.29□□□□□ -0.12
DDX55-202ENST00000354291 GLOD5A6NK44 160 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 HCRTR2O43614 444 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 CGAP01215 116 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 SOD3P08294 240 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 INHBAP08476 426 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 RBP1P09455 135 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 GTF2H2Q13888 395 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 PRR14LQ5THK1 2151 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 GTF2H2CQ6P1K8 395 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 MILR1Q7Z6M3 343 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 UBQLNLQ8IYU4 475 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 MMGT1Q8N4V1 131 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 WDSUB1Q8N9V3 476 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 FIG4Q92562 907 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 ADIPOR1Q96A54 375 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
DDX55-202ENST00000354291 GPR78Q96P69 363 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 NODALQ96S42 347 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 OSBPL11Q9BXB4 747 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 FUT8Q9BYC5 575 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 SHARPINQ9H0F6 387 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 VPS11Q9H270 941 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 PROCRQ9UNN8 238 aa14.28□□□□□ -0.12
DDX55-202ENST00000354291 FOXE1O00358 373 aaPredicted RBP14.27□□□□□ -0.13
DDX55-202ENST00000354291 PLPP1O14494 284 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 EMC8O43402 210 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 SPRY1O43609 319 aaPredicted RBP14.27□□□□□ -0.13
DDX55-202ENST00000354291 ABCB7O75027 752 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 NDUFS7O75251 213 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 IGHV4-39P01824 125 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 CD8BP10966 210 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 ZNF708P17019 499 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 BUD31P41223 144 aaPredicted RBP14.27□□□□□ -0.13
DDX55-202ENST00000354291 SERPINB9P50453 376 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 TNFRSF17Q02223 184 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 FAPQ12884 760 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 CUL3Q13618 768 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 NNATQ16517 81 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 CPSF6Q16630 551 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX55-202ENST00000354291 NUP54Q7Z3B4 507 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 GOLGA7Q7Z5G4 137 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 RNF175Q8N4F7 328 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 L3MBTL4Q8NA19 623 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 ATP6V1E2Q96A05 226 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 HS6ST2Q96MM7 605 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 RHNO1Q9BSD3 238 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 TMEM204Q9BSN7 226 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 PLA2G12AQ9BZM1 189 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 LYARQ9NX58 379 aaKnown RBP14.27□□□□□ -0.13
DDX55-202ENST00000354291 CPSF2Q9P2I0 782 aaKnown RBP14.27□□□□□ -0.13
DDX55-202ENST00000354291 TMCO1Q9UM00 188 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 MEGF8Q7Z7M0 2845 aa14.27□□□□□ -0.13
DDX55-202ENST00000354291 UQCRHLA0A096LP55 91 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 PPM1BO75688 479 aa14.26□□□□□ -0.13
DDX55-202ENST00000354291 CLDN9O95484 217 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms