RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 UBE2J2Q8N2K1 259 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 NR4A3Q92570 626 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 DIO2Q92813 273 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 ATF6BQ99941 703 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 PRR14Q9BWN1 585 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 B3GAT2Q9NPZ5 323 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 TMEM39AQ9NV64 488 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 CNIH4Q9P003 139 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 IGKV1-8A0A0C4DH67 115 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 HPGDSO60760 199 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 SERPIND1P05546 499 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 SLC2A2P11168 524 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-202ENST00000352393 CDH11P55287 796 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 CD83Q01151 205 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 ZNF155Q12901 538 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-202ENST00000352393 TRAM2Q15035 370 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 TRIQKQ629K1 86 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 NANOGNBQ7Z5D8 188 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 ING5Q8WYH8 240 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 COQ7Q99807 217 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 RBFOX1Q9NWB1 397 aaKnown RBP23.03■■□□□ 1.28
CPNE1-202ENST00000352393 CLCA2Q9UQC9 943 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 LIPT1Q9Y234 373 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 IRAK3Q9Y616 596 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 KCNE3Q9Y6H6 103 aa23.03■■□□□ 1.28
CPNE1-202ENST00000352393 GLOD5A6NK44 160 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 PROM1O43490 865 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 FAM157BP0CG42 384 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 PTBP1P26599 531 aaKnown RBP eCLIP23.02■■□□□ 1.28
CPNE1-202ENST00000352393 OMPP47874 163 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 DUSP2Q05923 314 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 RIN1Q13671 783 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 AADACL4Q5VUY2 407 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 KIAA1161Q6NSJ0 714 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 BHLHB9Q6PI77 547 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 PLET1Q6UQ28 207 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 Q8N402 240 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 NLGN4YQ8NFZ3 816 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-202ENST00000352393 CXorf40AQ8TE69 158 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 FAM46AQ96IP4 442 aaKnown RBP23.02■■□□□ 1.28
CPNE1-202ENST00000352393 SEMA4GQ9NTN9 838 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 C4orf51C9J302 202 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 NTN1O95631 604 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 ALPPL2P10696 532 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 CEBPBP17676 345 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 P2RY14Q15391 338 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 PLPP4Q5VZY2 271 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 LHFPL3Q86UP9 236 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 C11orf74Q86VG3 221 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 LIX1LQ8IVB5 337 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 ETFBKMTQ8IXQ9 262 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 GJD3Q8N144 294 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 OR56A1Q8NGH5 318 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 OR4Q3Q8NH05 313 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 ZNF649Q9BS31 505 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 KLHL31Q9H511 634 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 KLHL21Q9UJP4 597 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 GPR55Q9Y2T6 319 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-202ENST00000352393 PCDHGB7Q9Y5F8 929 aa23.02■■□□□ 1.28
CPNE1-202ENST00000352393 SHISA3A0PJX4 238 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 FAM25AB3EWG3 89 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 FAM25CB3EWG5 89 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 FAM25GB3EWG6 89 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 TRIM3O75382 744 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-202ENST00000352393 ALAS2P22557 587 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 ACSM1Q08AH1 577 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 TATDN3Q17R31 274 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 TMEM35AQ53FP2 167 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 CLEC12AQ5QGZ9 265 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 ADCK2Q7Z695 626 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 DUSP18Q8NEJ0 188 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 CNRIP1Q96F85 164 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-202ENST00000352393 C16orf58Q96GQ5 468 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 LGR4Q9BXB1 951 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 SYNDIG1Q9H7V2 258 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 ACOXLQ9NUZ1 547 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 MALT1Q9UDY8 824 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 MYO10Q9HD67 2058 aa23.01■■□□□ 1.27
CPNE1-202ENST00000352393 FRS3O43559 492 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ERAL1O75616 437 aaKnown RBP23■■□□□ 1.27
CPNE1-202ENST00000352393 SLC35G4P0C7Q5 338 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 EVX1P49640 407 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 MNX1P50219 401 aaPredicted RBP23■■□□□ 1.27
CPNE1-202ENST00000352393 CDK3Q00526 305 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ZIC1Q15915 447 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TMEM44Q2T9K0 475 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF750Q32MQ0 723 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ZNF311Q5JNZ3 666 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 SNAP47Q5SQN1 464 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 MARCH9Q86YJ5 346 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 TMEM145Q8NBT3 493 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 C19orf18Q8NEA5 215 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 OR4F15Q8NGB8 312 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 RFKQ969G6 155 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 MOAP1Q96BY2 351 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 SLC38A1Q9H2H9 487 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 ANKRD19PQ9H560 264 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 POLMQ9NP87 494 aaPredicted RBP23■■□□□ 1.27
CPNE1-202ENST00000352393 ASB4Q9Y574 426 aa23■■□□□ 1.27
CPNE1-202ENST00000352393 GABRPO00591 440 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms