RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RHCEP18577 417 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 UGT2B15P54855 530 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 KCNC4Q03721 635 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 FAHD1Q6P587 224 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 PODNL1Q6PEZ8 512 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
TRIM4-201ENST00000349062 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 B3GNT7Q8NFL0 401 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 GGHQ92820 318 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 KCNS3Q9BQ31 491 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 EGLN3Q9H6Z9 239 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 CASC3O15234 703 aaKnown RBP13.05□□□□□ -0.32
TRIM4-201ENST00000349062 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 RDH16O75452 317 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 CCDC159P0C7I6 412 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 ERGP11308 486 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 RGS8P57771 180 aaPredicted RBP13.05□□□□□ -0.32
TRIM4-201ENST00000349062 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
TRIM4-201ENST00000349062 PRR5P85299 388 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 RUNX2Q13950 521 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 TIGD6Q17RP2 521 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 SMARCD3Q6STE5 483 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 AVL9Q8NBF6 648 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 SUN3Q8TAQ9 357 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 BEX2Q9BXY8 128 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 FOXQ1Q9C009 403 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 SLC9A8Q9Y2E8 581 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
TRIM4-201ENST00000349062 PTHP01270 115 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ITIH1P19827 911 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CD6P30203 668 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 GGT2P36268 569 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 LIPAP38571 399 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 GPR4P46093 362 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PDX1P52945 283 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PPP5CP53041 499 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 SLC16A1P53985 500 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 C21orf58P58505 322 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ENPP2Q13822 863 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 E2F2Q14209 437 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 C10orf62Q5T681 223 aaPredicted RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CDC73Q6P1J9 531 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 SLC22A18ASQ8N1D0 253 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 TTLQ8NG68 377 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 OR4K5Q8NGD3 323 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 OR9A4Q8NGU2 314 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CNDP2Q96KP4 475 aaKnown RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PRRG3Q9BZD7 231 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 C3orf14Q9HBI5 128 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 FBXO34Q9NWN3 711 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 NAALAD2Q9Y3Q0 740 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 SSX4O60224 188 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ENTPD6O75354 484 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 RECKO95980 971 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 TNFP01375 233 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 APOA1P02647 267 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 JUNDP17535 347 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 FUT1P19526 365 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 DRD1P21728 446 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 KHKP50053 298 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PGDP52209 483 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CRISP1P54107 249 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 HHEXQ03014 270 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 RHOXF1Q8NHV9 184 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF486Q96H40 463 aaPredicted RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 OR5M11Q96RB7 305 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 UCK2Q9BZX2 261 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 SOHLH2Q9NX45 425 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CENPVL1A0A0U1RR11 272 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 B3GALT2O43825 422 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 SERPINI2O75830 405 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CCNYL3P0C7X3 344 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 ELAVL4P26378 380 aaKnown RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 KEAP1Q14145 624 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PROX2Q3B8N5 592 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 EOGTQ5NDL2 527 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 PAQR6Q6TCH4 344 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 FAM46AQ96IP4 442 aaKnown RBP13.04□□□□□ -0.32
TRIM4-201ENST00000349062 Q96MT0 163 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 CTRCQ99895 268 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
TRIM4-201ENST00000349062 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
TRIM4-201ENST00000349062 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
TRIM4-201ENST00000349062 TLR4O00206 839 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 WWP2O00308 870 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 PROM1O43490 865 aa13.03□□□□□ -0.32
TRIM4-201ENST00000349062 PDE9AO76083 593 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms