RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 ECSITQ9BQ95 431 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 CPPED1Q9BRF8 314 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-204ENST00000348259 SPATA9Q9BWV2 254 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 HES7Q9BYE0 225 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 ROGDIQ9GZN7 287 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.03□□□□□ -0.96
MRPL55-204ENST00000348259 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 GORASP2Q9H8Y8 452 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-204ENST00000348259 C14orf105Q9NVL8 296 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 ARMC1Q9NVT9 282 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 MAGEL2Q9UJ55 1249 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 PACSIN3Q9UKS6 424 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 CORO2BQ9UQ03 480 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 SNX13Q9Y5W8 968 aa9.03□□□□□ -0.96
MRPL55-204ENST00000348259 A0A0J9YVX5 310 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 URADA6NGE7 173 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 EVPLLA8MZ36 301 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 H0Y3Z8 333 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 SAP18O00422 153 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 CASQ2O14958 399 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 GPIP06744 558 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 SMIM10L1P0DMW3 83 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 TCN1P20061 433 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 FBLP22087 321 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 SLC7A1P30825 629 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 MSX2P35548 267 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 FRKP42685 505 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 GZMMP51124 257 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 RGS1Q08116 209 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 TUBA3CQ13748 450 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 MLC1Q15049 377 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 MRM1Q6IN84 353 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 TUBA3EQ6PEY2 450 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 VN1R4Q7Z5H5 301 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 ASPGQ86U10 573 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 SERPINA11Q86U17 422 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 DOLPP1Q86YN1 238 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 FAM47BQ8NA70 645 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 FAM156AQ8NDB6 213 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 PAPD5Q8NDF8 572 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 PYDC1Q8WXC3 89 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 GFM2Q969S9 779 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 GAL3ST3Q96A11 431 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 SMIM10Q96HG1 83 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 LRGUKQ96M69 825 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 PANX1Q96RD7 426 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 THUMPD3Q9BV44 507 aaKnown RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 AICDAQ9GZX7 198 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 CCM2LQ9NUG4 571 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-204ENST00000348259 MKL2Q9ULH7 1088 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 DNAJC13O75165 2243 aa9.02□□□□□ -0.97
MRPL55-204ENST00000348259 ZNF407Q9C0G0 2248 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 C1orf226A1L170 272 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 FAM220BPB1ANY3 271 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 E9PLN8 166 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 H0YGG7 62 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 CLIC1O00299 241 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ARPC2O15144 300 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ZNHIT1O43257 154 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 PEX1O43933 1283 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MAN1A2O60476 641 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 SH3BGRLO75368 114 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 NEURL1O76050 574 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ANP32DO95626 131 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 CYC1P08574 325 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 IL3P08700 152 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 FAM58BPP0C7Q3 252 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 SLC35G6P0C7Q6 338 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 IL1RNP18510 177 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 GGT1P19440 569 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 HIST1H1TP22492 207 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ATP5A1P25705 553 aaKnown RBP9.01□□□□□ -0.97
MRPL55-204ENST00000348259 VHLP40337 213 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MAGEA8P43361 318 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MTPNP58546 118 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ARF3P61204 181 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-204ENST00000348259 SELPLGQ14242 412 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 RNFT1Q5M7Z0 435 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ABHD17BQ5VST6 288 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 PLAG1Q6DJT9 500 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 FAAH2Q6GMR7 532 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 TRIM40Q6P9F5 258 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MEX3BQ6ZN04 569 aaKnown RBP9.01□□□□□ -0.97
MRPL55-204ENST00000348259 LRRC74BQ6ZQY2 392 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 SPATA24Q86W54 205 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 ZNF227Q86WZ6 799 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 PLD3Q8IV08 490 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MMP21Q8N119 569 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 BEST3Q8N1M1 668 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 PQLC1Q8N2U9 271 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 MARVELD2Q8N4S9 558 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 TRIML2Q8N7C3 387 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 CAMKVQ8NCB2 501 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 OR2T12Q8NG77 320 aa9.01□□□□□ -0.97
MRPL55-204ENST00000348259 PSMA8Q8TAA3 256 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms