RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TBPL2Q6SJ96 375 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 B3GNT8Q7Z7M8 397 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 CYP4Z1Q86W10 505 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 OR7G1Q8NGA0 311 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 APOBEC4Q8WW27 367 aaKnown RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 RDH12Q96NR8 316 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 NR1H4Q96RI1 486 aaPredicted RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 SDF2Q99470 211 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 AMBRA1Q9C0C7 1298 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 MTHFD2LQ9H903 347 aaPredicted RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 TMEM9BQ9NQ34 198 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 VNN3Q9NY84 501 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 PRODH2Q9UF12 536 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 SLC13A4Q9UKG4 626 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 ERVK-19Q9WJR5 959 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 SLC9A8Q9Y2E8 581 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 C17orf105B2RV13 164 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 STX11O75558 287 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 TIAF1O95411 115 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 ALPLP05186 524 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 CD59P13987 128 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 SSTR4P31391 388 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 GABRA3P34903 492 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 EMDP50402 254 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 SPIBQ01892 262 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 OCA2Q04671 838 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 GK3PQ14409 553 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 PUM1Q14671 1186 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTN-201ENST00000348225 NKAIN1Q4KMZ8 207 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 NHSL2Q5HYW2 709 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 ZNF311Q5JNZ3 666 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 FRRS1Q6ZNA5 592 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 RBM44Q6ZP01 1051 aaKnown RBP17.38■□□□□ 0.37
PTN-201ENST00000348225 COX15Q7KZN9 410 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 OLIG3Q7RTU3 272 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 TSEN54Q7Z6J9 526 aaKnown RBP17.38■□□□□ 0.37
PTN-201ENST00000348225 TMEM179BQ7Z7N9 219 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 CARM1Q86X55 608 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 MARVELD2Q8N4S9 558 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 TSLPQ969D9 159 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 PIP5K1AQ99755 562 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 ZNF350Q9GZX5 532 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 OR10A5Q9H207 317 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 POLE3Q9NRF9 147 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 PNO1Q9NRX1 252 aaKnown RBP17.38■□□□□ 0.37
PTN-201ENST00000348225 C14orf105Q9NVL8 296 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 AKAP7Q9P0M2 348 aaPredicted RBP17.38■□□□□ 0.37
PTN-201ENST00000348225 IFT52Q9Y366 437 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 PCDHGA8Q9Y5G5 932 aa17.38■□□□□ 0.37
PTN-201ENST00000348225 FRYLO94915 3013 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 IGLV3-12A0A075B6K2 115 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 TCRBV16S1A1N1A0A5B0 115 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 PRAMEF25A6NGN4 478 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 SYT5O00445 386 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 POLR1CO15160 346 aaPredicted RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 PRKAR1BP31321 381 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 RORAP35398 523 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 DCDP81605 110 aaKnown RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 PPP2R2BQ00005 443 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 EPS8Q12929 822 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 PPP1R8Q12972 351 aaKnown RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 ELAVL1Q15717 326 aaKnown RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 TYW3Q6IPR3 259 aaKnown RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 PEX5LQ8IYB4 626 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 SUMF1Q8NBK3 374 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 PIK3R3Q92569 461 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 PMM1Q92871 262 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 FKBP10Q96AY3 582 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 VSTM2LQ96N03 204 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 ADI1Q9BV57 179 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 CTSFQ9UBX1 484 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 MKL2Q9ULH7 1088 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 HCN4Q9Y3Q4 1203 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 TESMINQ9Y4I5 508 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 ORC6Q9Y5N6 252 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 MAGED1Q9Y5V3 778 aaPredicted RBP17.37■□□□□ 0.37
PTN-201ENST00000348225 CLCA3PQ9Y6N3 262 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 CCDC88CQ9P219 2028 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 ZNF318Q5VUA4 2279 aa17.37■□□□□ 0.37
PTN-201ENST00000348225 HRKO00198 91 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 TNFRSF11BO00300 401 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 DLGAP1O14490 977 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 FCMRO60667 390 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 CPNE3O75131 537 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 LGI1O95970 557 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 RECKO95980 971 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 THRBP10828 461 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 CCKBRP32239 447 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 MERTKQ12866 999 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 PDK3Q15120 406 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 NSDHLQ15738 373 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 SWT1Q5T5J6 900 aaKnown RBP17.36■□□□□ 0.37
PTN-201ENST00000348225 DHRS4L2Q6PKH6 230 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 TMEM151BQ8IW70 566 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 HS3ST5Q8IZT8 346 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ZNF619Q8N2I2 560 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 OR52P1PQ8NH57 321 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 FBXL20Q96IG2 436 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 ART5Q96L15 291 aa17.36■□□□□ 0.37
PTN-201ENST00000348225 VN1R1Q9GZP7 353 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms