RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR7D2Q96RA2 312 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ABCB9Q9NP78 766 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 EXOSC4Q9NPD3 245 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TXNL4BQ9NX01 149 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 YBX2Q9Y2T7 364 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 STON1Q9Y6Q2 735 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LOC105369274A0A096LPK9 316 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 LOC102723532A0A0G2JNH3 316 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MRPS14O60783 128 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CTSVO60911 334 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 KAT7O95251 611 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MED26O95402 600 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ATP5A1P25705 553 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 GPR4P46093 362 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CDC42P60953 191 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PRKCDQ05655 676 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 EIF4HQ15056 248 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 P2RY14Q15391 338 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 FCRLBQ6BAA4 426 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 C1orf94Q6P1W5 598 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZAR1Q86SH2 424 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OR4N4Q8N0Y3 316 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TAGAPQ8N103 731 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OR2L3Q8NG85 312 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OR4E2Q8NGC2 313 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 RGMAQ96B86 450 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 NECTIN4Q96NY8 510 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 AIF1LQ9BQI0 150 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HDAC8Q9BY41 377 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 POLR2J2Q9GZM3 115 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SAP130Q9H0E3 1048 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 IGFLR1Q9H665 355 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF556Q9HAH1 456 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PLSCR3Q9NRY6 295 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 C20orf141Q9NUB4 165 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF624Q9P2J8 865 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 FBXL4Q9UKA2 621 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TMCC3Q9ULS5 477 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZFHX4Q86UP3 3567 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ALPK2Q86TB3 2170 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 A0A087WV48 116 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 A0A1B0GVC2 190 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ARRDC5A6NEK1 342 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF860A6NHJ4 632 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 A6NIN4 97 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 IMPA2O14732 288 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SLC31A1O15431 190 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MAGEB4O15481 346 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PROM1O43490 865 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 RFPL3O75679 317 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CDRT1O95170 752 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ADAP00813 363 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 NR2F1P10589 423 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TFPIP10646 304 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 IL9P15248 144 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ITGA2P17301 1181 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 DDX5P17844 614 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HIST1H1TP22492 207 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CSTF2P33240 577 aaKnown RBP eCLIP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SDC2P34741 201 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SSR2P43308 183 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MAGEA8P43361 318 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 OMPP47874 163 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 AVPR1BP47901 424 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 LSSP48449 732 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 BPIFB3P59826 476 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TUBA1BP68363 451 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ELOAQ14241 798 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HEPACAMQ14CZ8 416 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CST6Q15828 149 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TRMT12Q53H54 448 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 FAM46CQ5VWP2 391 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 FBXO42Q6P3S6 717 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZC3H14Q6PJT7 736 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TUBA1AQ71U36 451 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF367Q7RTV3 350 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SLC30A8Q8IWU4 369 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 KRT78Q8N1N4 520 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SMARCD2Q92925 531 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM80Q96HE8 168 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MYADMQ96S97 322 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 BEX2Q9BXY8 128 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CLN6Q9NWW5 311 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 NDUFB11Q9NX14 153 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 ZSCAN32Q9NX65 697 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CCDC59Q9P031 241 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 MOSPD1Q9UJG1 213 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 TP53BP1Q12888 1972 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 HEATR5AQ86XA9 2040 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 C2orf92A0A1B0GVN3 265 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 C5orf58C9J3I9 102 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 SOCS6O14544 535 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 PLA2G10O15496 165 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CNOT3O75175 753 aaKnown RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CELA2BP08218 269 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-201ENST00000347613 GKN3PP0CG01 181 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 CLUP10909 449 aa5.66□□□□□ -1.5
CLCN3-201ENST00000347613 F3P13726 295 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms