RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 C9orf16Q9BUW7 83 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 SLC7A5P2Q9GIP4 190 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 SLC26A1Q9H2B4 701 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 MTHFD2LQ9H903 347 aaPredicted RBP10.22□□□□□ -0.77
ECM1-201ENST00000346569 AKIRIN1Q9H9L7 192 aaPredicted RBP10.22□□□□□ -0.77
ECM1-201ENST00000346569 THSD1Q9NS62 852 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 NDUFAF4Q9P032 175 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 CTSFQ9UBX1 484 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 OAZ3Q9UMX2 235 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 ABCG2Q9UNQ0 655 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 SATB2Q9UPW6 733 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 PCDHGB3Q9Y5G1 929 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 PCDHGA1Q9Y5H4 931 aa10.22□□□□□ -0.77
ECM1-201ENST00000346569 HEMK1Q9Y5R4 338 aaPredicted RBP10.22□□□□□ -0.77
ECM1-201ENST00000346569 PCNX2A6NKB5 2137 aa10.21□□□□□ -0.77
ECM1-201ENST00000346569 SYNDIG1LA6NDD5 238 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 SAC3D1A6NKF1 404 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 TTC36A6NLP5 189 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 PDLIM1O00151 329 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 DLGAP1O14490 977 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 CNOT3O75175 753 aaKnown RBP10.21□□□□□ -0.78
ECM1-201ENST00000346569 DDAH2O95865 285 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 EPPINO95925 133 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 LGI1O95970 557 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ALBP02768 609 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 IGKV3-11P04433 115 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 IFNA16P05015 189 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ZNF28P17035 718 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 TNFRSF1BP20333 461 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 AQP4P55087 323 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ELAVL1Q15717 326 aaKnown RBP10.21□□□□□ -0.78
ECM1-201ENST00000346569 NSDHLQ15738 373 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 GPAT3Q53EU6 434 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 MRPL14Q6P1L8 145 aaKnown RBP10.21□□□□□ -0.78
ECM1-201ENST00000346569 ZNF517Q6ZMY9 492 aaPredicted RBP10.21□□□□□ -0.78
ECM1-201ENST00000346569 FRRS1Q6ZNA5 592 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 GLRX5Q86SX6 157 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 KRT73Q86Y46 540 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 GALNT4Q8N4A0 578 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 OR7G1Q8NGA0 311 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 OR5K1Q8NHB7 308 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 PMM1Q92871 262 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ZNF354BQ96LW1 612 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ZNF597Q96LX8 424 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 BTBD9Q96Q07 612 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 CMKLR1Q99788 373 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 SPATA5L1Q9BVQ7 753 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 AMBRA1Q9C0C7 1298 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 OR10A5Q9H207 317 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 FOLH1BQ9HBA9 442 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 C8orf4Q9NR00 106 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 PNO1Q9NRX1 252 aaKnown RBP10.21□□□□□ -0.78
ECM1-201ENST00000346569 VNN3Q9NY84 501 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 BAG5Q9UL15 447 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 MKL2Q9ULH7 1088 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 ERVK-19Q9WJR5 959 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 CHST2Q9Y4C5 530 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 AK5Q9Y6K8 562 aa10.21□□□□□ -0.78
ECM1-201ENST00000346569 GXYLT2A0PJZ3 443 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 C17orf105B2RV13 164 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 TMX2-CTNND1H3BSU7 103 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 hCG_2039718K7EN88 272 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CPNE3O75131 537 aaKnown RBP10.2□□□□□ -0.78
ECM1-201ENST00000346569 RFPL3O75679 317 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 DIRAS1O95057 198 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 RASAL1O95294 804 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 AK1P00568 194 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CT45A8P0DMV1 189 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CT45A9P0DMV2 189 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 ACADSP16219 412 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 TNNI3P19429 210 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 ATP6V1C1P21283 382 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 GABRA3P34903 492 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 DCTP40126 519 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 OR1E2P47887 323 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 GPR143P51810 404 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 HMGA2P52926 109 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 IST1P53990 364 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 SLC37A1P57057 533 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 KCNC4Q03721 635 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 OCA2Q04671 838 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 ISXQ2M1V0 245 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 MINDY4Q4G0A6 757 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CYP27C1Q4G0S4 372 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CT45A2Q5DJT8 189 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 MLIPQ5VWP3 458 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 TYW3Q6IPR3 259 aaKnown RBP10.2□□□□□ -0.78
ECM1-201ENST00000346569 C16orf62Q7Z3J2 963 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 COMTD1Q86VU5 262 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 SVOPLQ8N434 492 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 CBR4Q8N4T8 237 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 OR4D11Q8NGI4 311 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 C16orf52Q8NHV5 167 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 SPPL2AQ8TCT8 520 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 ZNF721Q8TF20 911 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 GEMIN6Q8WXD5 167 aaKnown RBP10.2□□□□□ -0.78
ECM1-201ENST00000346569 PIK3R3Q92569 461 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 RNF31Q96EP0 1072 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 FBXL20Q96IG2 436 aa10.2□□□□□ -0.78
ECM1-201ENST00000346569 VPS50Q96JG6 964 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms