RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ELP4Q96EB1 424 aa14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 VSTM2LQ96N03 204 aa14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 OSBPL11Q9BXB4 747 aa14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 RUBCNLQ9H714 662 aa14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 ZNF703Q9H7S9 590 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 ACSS1Q9NUB1 689 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 NOP53Q9NZM5 478 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 HECTD1Q9ULT8 2610 aa14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 SPTAN1Q13813 2472 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-201ENST00000346501 TMEM120BA0PK00 339 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 AQP7O14520 342 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 AGAP20933 346 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 PRPS1L1P21108 318 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 BGNP21810 368 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 PNLIPRP2P54317 469 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 MAGOHP61326 146 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 PRR5P85299 388 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 GTF3C1Q12789 2109 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 DUSP8Q13202 625 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 SF3B4Q15427 424 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■■■■ 33.9
TSPAN4-201ENST00000346501 LSM12Q3MHD2 195 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 CYP27C1Q4G0S4 372 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 CPTPQ5TA50 214 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 IL23RQ5VWK5 629 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 TMEM81Q6P7N7 255 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 TRILQ7L0X0 811 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 OR2L13Q8N349 312 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 ZBTB9Q96C00 473 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 TMEM41AQ96HV5 264 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 ADOQ96SZ5 270 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 C1orf50Q9BV19 199 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 ANKRA2Q9H9E1 313 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 ACKR4Q9NPB9 350 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 ICE1Q9Y2F5 2266 aa14.46□□□□□ -0.09
TSPAN4-201ENST00000346501 A0A1B0GVC2 190 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 PRAMEF25A6NGN4 478 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 FAM47E-STBD1D6RA91 191 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 UPK1AO00322 258 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 SCAMP2O15127 329 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ITM2AO43736 263 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 UGT2B11O75310 529 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 KCNH1O95259 989 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 HOXD4P09016 255 aaPredicted RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 RNF224P0DH78 156 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CT45A8P0DMV1 189 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CT45A9P0DMV2 189 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 SLC18A1P54219 525 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 PRKAG1P54619 331 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CORO7P57737 925 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ART3Q13508 389 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 PDE7AQ13946 482 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CASP8Q14790 479 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 GXYLT1Q4G148 440 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CT45A2Q5DJT8 189 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ANKRD26P1Q6NSI1 321 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ZNF585AQ6P3V2 769 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ACAD11Q709F0 780 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ZNF551Q7Z340 670 aaPredicted RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ZNF781Q8N8C0 355 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 SIMC1Q8NDZ2 872 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 MGARPQ8TDB4 240 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 SLC35A4Q96G79 324 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 TMBIM4Q9HC24 238 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 HHATLQ9HCP6 504 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CHST11Q9NPF2 352 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 SDHAF3Q9NRP4 125 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 ATP6V1HQ9UI12 483 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 CBLCQ9ULV8 474 aa14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 EXO1Q9UQ84 846 aaKnown RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 USP9YO00507 2555 aaPredicted RBP14.45□□□□□ -0.1
TSPAN4-201ENST00000346501 A0A1W2PRB8 838 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 LRRC3CA6NJW4 275 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 PRSS44E7EML9 344 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 GNB5O14775 395 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 WDR1O75083 606 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 ICOSLGO75144 302 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 GABRA1P14867 456 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 EMX2Q04743 252 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 TIGD3Q6B0B8 471 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 ANGPTL8Q6UXH0 198 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 C3P1Q6ZMU1 363 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 CDRT4Q8N9R6 151 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 NUP43Q8NFH3 380 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 NEIL3Q8TAT5 605 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 RAB3IL1Q8TBN0 382 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 CA5BP1Q8WTZ4 195 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 ITLN2Q8WWU7 325 aaPredicted RBP14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 RND1Q92730 232 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 HGDQ93099 445 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 CIDECQ96AQ7 238 aaPredicted RBP14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 PPP1R36Q96LQ0 422 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 C3orf30Q96M34 536 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 EQTNQ9NQ60 294 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 THAP1Q9NVV9 213 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 ALKBH4Q9NXW9 302 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 C15orf41Q9Y2V0 281 aa14.44□□□□□ -0.1
TSPAN4-201ENST00000346501 KLF2Q9Y5W3 355 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms