RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 C1orf74Q96LT6 269 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 GGT3PA6NGU5 568 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 GGT2P36268 569 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 BDKRB1P46663 353 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM156Q8N614 296 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 ALG8Q9BVK2 526 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 CNOT2Q9NZN8 540 aaKnown RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 PPP4R1LQ9P1A2 415 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 ARGFXA6NJG6 315 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 HTR3BO95264 441 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 CSKP41240 450 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM150AQ86TG1 271 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 EEF1E1-BLOC1S5C9J1V9 151 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 VEGFAP15692 232 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 ECI1P42126 302 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 SERTAD3Q9UJW9 196 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 SYNGR4O95473 234 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 HLA-HP01893 362 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 PPP3CBP16298 524 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 IL1R2P27930 398 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 SHMT2P34897 504 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 ALKBH4Q9NXW9 302 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 FAM53CQ9NYF3 392 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 LOC730098B7Z3J9 87 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 GAPDHSO14556 408 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 SNNO75324 88 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 PIGRP01833 764 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 NKX2-5P52952 324 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 FCRL3Q96P31 734 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-201ENST00000345617 INPPL1O15357 1258 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 UGDHO60701 494 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 PRKACGP22612 351 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 GPR19Q15760 415 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 SHFQ7M4L6 423 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF695Q8IW36 515 aa18.46■□□□□ 0.54
HDAC4-201ENST00000345617 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 LFNGQ8NES3 379 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 KIAA0319Q5VV43 1072 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 GKN2Q86XP6 184 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 ZFAND1Q8TCF1 268 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 GTF2H4Q92759 462 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 OR52A5Q9H2C5 316 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 ALDOAP04075 364 aaKnown RBP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TAS2R19P59542 299 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 OGDHQ02218 1023 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 OR6Q1Q8NGQ2 317 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 KCNIP2Q9NS61 270 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 CCL16O15467 120 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 CSTAP01040 98 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 EGFP01133 1207 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 SBK2P0C263 348 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 HSD17B7P56937 341 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TPRG1Q6ZUI0 275 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TPRA1Q86W33 373 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 CNTNAP3Q9BZ76 1288 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 SCAMP2O15127 329 aaKnown RBP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 HEXBP07686 556 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 RBMS2Q15434 407 aaKnown RBP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TMEM225Q6GV28 225 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 OR9A4Q8NGU2 314 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 CPT1CQ8TCG5 803 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF286AQ9HBT8 521 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 IL1AP01583 271 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 SYPP08247 313 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 PCGF2P35227 344 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 DBPQ10586 325 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 PGAM5Q96HS1 289 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 NIPSNAP3BQ9BS92 247 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TLE6Q9H808 572 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 C1orf226A1L170 272 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 METTL2AQ96IZ6 378 aaKnown RBP18.45■□□□□ 0.54
HDAC4-201ENST00000345617 UFSP2Q9NUQ7 469 aa18.45■□□□□ 0.54
HDAC4-201ENST00000345617 TSPAN11A1L157 253 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 ACTL6BO94805 426 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 RAB40ALP0C0E4 278 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 CPT2P23786 658 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 TAP2Q03519 686 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 INCA1Q0VD86 236 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 RCBTB1Q8NDN9 531 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 RAB40AQ8WXH6 277 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 LRIG1Q96JA1 1093 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 CARS2Q9HA77 564 aaKnown RBP18.44■□□□□ 0.54
HDAC4-201ENST00000345617 SPTBN1Q01082 2364 aaKnown RBP18.44■□□□□ 0.54
HDAC4-201ENST00000345617 STSP08842 583 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 RPS15AP62244 130 aaKnown RBP18.44■□□□□ 0.54
HDAC4-201ENST00000345617 RAB35Q15286 201 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 SLC17A6Q9P2U8 582 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 PCDHGA5Q9Y5G8 931 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-201ENST00000345617 TDRD6O60522 2096 aaKnown RBP18.44■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF136P52737 540 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 PPA1Q15181 289 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 CHRNA6Q15825 494 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 ARHGAP40Q5TG30 622 aa18.44■□□□□ 0.54
HDAC4-201ENST00000345617 ZNF585AQ6P3V2 769 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms