RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KLHL1Q9NR64 748 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZFP57Q9NU63 452 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 UFSP2Q9NUQ7 469 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZSCAN32Q9NX65 697 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 STOX2Q9P2F5 926 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 BTNL2Q9UIR0 455 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FZD4Q9ULV1 537 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ERVK-19Q9WJR5 959 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PLEKHA6Q9Y2H5 1048 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PCDHB7Q9Y5E2 793 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PCDHB1Q9Y5F3 818 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ENPP4Q9Y6X5 453 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 NYNRINQ9P2P1 1898 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 A0A1W2PRB8 838 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SERTM1A2A2V5 107 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 RAB19A4D1S5 217 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 MOXD2PA6NHM9 499 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 LRRC72A6NJI9 287 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SNRPGP15A8MWD9 76 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZBTB42B2RXF5 422 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 MCIDASD6RGH6 385 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 J3QL48 77 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CACNB4O00305 520 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FAAHO00519 579 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GABRPO00591 440 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PHYHO14832 338 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GSTZ1O43708 216 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CREBL2O60519 120 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GALR3O60755 368 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CLDN9O95484 217 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 HIST1H2ABP04908 130 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 HEXAP06865 529 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ACAA1P09110 424 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ACP2P11117 423 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FOLR2P14207 255 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 AKAP5P24588 427 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 RAB4BP61018 213 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 BDH1Q02338 343 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 MADCAM1Q13477 382 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 BOP1Q14137 746 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM132BQ14DG7 1078 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TRAM1Q15629 374 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 UGT8Q16880 541 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 XKR6Q5GH73 641 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ELFN2Q5R3F8 820 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 FUT10Q6P4F1 479 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ZC3H14Q6PJT7 736 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 HIST3H2AQ7L7L0 130 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TAC4Q86UU9 113 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 METTL23Q86XA0 190 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SYT12Q8IV01 421 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 LINC00471Q8N535 108 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TEX26Q8N6G2 289 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EID2Q8N6I1 236 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SIDT2Q8NBJ9 832 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 HIST1H2ACQ93077 130 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ESAMQ96AP7 390 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 RGMAQ96B86 450 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CDKN2AIPNLQ96HQ2 116 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TOX2Q96NM4 488 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TSSK3Q96PN8 268 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 EGFL8Q99944 293 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ARHGAP9Q9BRR9 750 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 GSDMCQ9BYG8 508 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 POLR1EQ9GZS1 481 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 BTBD1Q9H0C5 482 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 SLC6A20Q9NP91 592 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CRTAC1Q9NQ79 661 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TAS2R3Q9NYW6 316 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
ATG4A-201ENST00000343524 PPT2Q9UMR5 302 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 ENTPD4Q9Y227 616 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 CA5BQ9Y2D0 317 aa7.68□□□□□ -1.18
ATG4A-201ENST00000343524 A0A0U1RQF3 1178 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ARGFXA6NJG6 315 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 H3BN98 237 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 IMPA2O14732 288 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 FFAR3O14843 346 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SCAMP1O15126 338 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 CTDSPLO15194 276 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 MID1O15344 667 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 GPR42O15529 346 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 REM1O75628 298 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RGS9O75916 674 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 OR2A4O95047 310 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 IGHV2-70P01814 119 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 RB1P06400 928 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 MMP2P08253 660 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 COX7A2P14406 83 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 IFNGR1P15260 489 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PAICSP22234 425 aaKnown RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PSMA3P25788 255 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ACADLP28330 430 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 GKP32189 559 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 CHI3L1P36222 383 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-201ENST00000343524 ETV5P41161 510 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 PTGER3P43115 390 aa7.67□□□□□ -1.18
ATG4A-201ENST00000343524 SELENOPP49908 381 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms