RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 AHSA1O95433 338 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 AK4P27144 223 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 NR4A2P43354 598 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 GAB1Q13480 694 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 UBXN2BQ14CS0 331 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 KDM4DQ6B0I6 523 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 SLC46A3Q7Z3Q1 461 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 OR4K13Q8NH42 304 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 S100A16Q96FQ6 103 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 PRRC1Q96M27 445 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 POLDIP3Q9BY77 421 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 ABCG4Q9H172 646 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 DUSP21Q9H596 190 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CXorf36Q9H7Y0 433 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 CARD8Q9Y2G2 431 aa6.8□□□□□ -1.32
VCAN-202ENST00000342785 MRPS17Q9Y2R5 130 aaKnown RBP6.8□□□□□ -1.32
VCAN-202ENST00000342785 TCRBV5S2A0A599 114 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR5K4A6NMS3 321 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 GASTP01350 101 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 LIPAP38571 399 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 C4orf46Q504U0 113 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 HSD17B12Q53GQ0 312 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 EOGTQ5NDL2 527 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 COX20Q5RI15 118 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ZNF613Q6PF04 617 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 RASSF6Q6ZTQ3 369 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 JAGN1Q8N5M9 183 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR6N2Q8NGY6 317 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 SGCDQ92629 289 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 FGF13Q92913 245 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ARRDC3Q96B67 414 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 DPH1Q9BZG8 443 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 SRA1Q9HD15 236 aaKnown RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 ERVK-11Q9UQG0 969 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 TRBV4-1A0A0J9YWV2 114 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ACPPP15309 386 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ERVFC1P60507 584 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 C6orf132Q5T0Z8 1188 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ENTHD1Q8IYW4 607 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 METTL27Q8N6F8 245 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 SGTBQ96EQ0 304 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ZNF419Q96HQ0 510 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 NIPSNAP1Q9BPW8 284 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 PLEKHA1Q9HB21 404 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 TAS2R16Q9NYV7 291 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 A0A1W2PQ09 198 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 GFYI3L273 518 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR2B3O76000 313 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 LDOC1O95751 146 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 ERP29P30040 261 aaKnown RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 MLLT3P42568 568 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 SLC6A12P48065 614 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 RAB40BQ12829 278 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 NTRK2Q16620 822 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 CD300LGQ6UXG3 332 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 PIAS4Q8N2W9 510 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 CDRT4Q8N9R6 151 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 HMGCLL1Q8TB92 370 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 COQ8BQ96D53 544 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 THSD1Q9NS62 852 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 NUFIP1Q9UHK0 495 aaKnown RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 PADI2Q9Y2J8 665 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 KLK4Q9Y5K2 254 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 TRIM3O75382 744 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 GAS6Q14393 721 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ALG10BQ5I7T1 473 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR2G6Q5TZ20 316 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ZNF627Q7L945 461 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 PARP16Q8N5Y8 322 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 AVL9Q8NBF6 648 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR52E1Q8NGJ3 308 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 LRRC20Q8TCA0 184 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 OR5M11Q96RB7 305 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 B3GNT4Q9C0J1 378 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 TEX10Q9NXF1 929 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 GRHPRQ9UBQ7 328 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 UPB1Q9UBR1 384 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 PRODH2Q9UF12 536 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 SSC5DA1L4H1 1573 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 HYKKA2RU49 373 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 FAM227AF5H4B4 570 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 I3L521 148 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ARHGAP33O14559 1287 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 PPM1BO75688 479 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 IFNA7P01567 189 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 CA3P07451 260 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 HTRA3P83110 453 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 GFOD2Q3B7J2 385 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 AGAP6Q5VW22 663 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 THOC7Q6I9Y2 204 aaKnown RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 ZNF765Q7L2R6 523 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 WDR53Q7Z5U6 358 aaPredicted RBP6.79□□□□□ -1.32
VCAN-202ENST00000342785 RPLP0P6Q8NHW5 317 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 CHTF18Q8WVB6 975 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 ACOT12Q8WYK0 555 aa6.79□□□□□ -1.32
VCAN-202ENST00000342785 AKAP1Q92667 903 aaKnown RBP eCLIP6.79□□□□□ -1.32
VCAN-202ENST00000342785 AGAP4Q96P64 663 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms