RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HRKO00198 91 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 PEX1O43933 1283 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 JMJD7P0C870 316 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 ITIH1P19827 911 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 TSPAN7P41732 249 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 MAPK11Q15759 364 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 RAB11FIP2Q7L804 512 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 OVCH1Q7RTY7 1134 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 GEMIN6Q8WXD5 167 aaKnown RBP16.15■□□□□ 0.18
CLDN4-201ENST00000340958 PIK3R3Q92569 461 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 DAZLQ92904 295 aaKnown RBP16.15■□□□□ 0.18
CLDN4-201ENST00000340958 STACQ99469 402 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 C9orf16Q9BUW7 83 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 BTBD2Q9BX70 525 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 OR8D2Q9GZM6 311 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 FOLH1BQ9HBA9 442 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 BCL2L10Q9HD36 194 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 DUSP22Q9NRW4 184 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 PRODH2Q9UF12 536 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 SLC13A4Q9UKG4 626 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 OAZ3Q9UMX2 235 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
CLDN4-201ENST00000340958 IGKV3D-11A0A0A0MRZ8 115 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 SYNDIG1LA6NDD5 238 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 CSO75390 466 aaKnown RBP16.14■□□□□ 0.17
CLDN4-201ENST00000340958 SOX30O94993 753 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 MFN2O95140 757 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 MT-CO3P00414 261 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 ALPPP05187 535 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 RPSAP08865 295 aaKnown RBP16.14■□□□□ 0.17
CLDN4-201ENST00000340958 OR1E2P47887 323 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 RFX3P48380 749 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 CLDN6P56747 220 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 RAB15P59190 212 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 KCNJ10P78508 379 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 FUT5Q11128 374 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 TAF11Q15544 211 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 ELAVL1Q15717 326 aaKnown RBP16.14■□□□□ 0.17
CLDN4-201ENST00000340958 PRAMEF8Q5VWM4 474 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 PRAMEF7Q5VXH5 474 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 DHRS13Q6UX07 377 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 MR1Q95460 341 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 SENP5Q96HI0 755 aaPredicted RBP16.14■□□□□ 0.17
CLDN4-201ENST00000340958 COQ10BQ9H8M1 238 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 PISDQ9UG56 409 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF639Q9UID6 485 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 FAM32AQ9Y421 112 aaKnown RBP16.14■□□□□ 0.17
CLDN4-201ENST00000340958 PCDHGA1Q9Y5H4 931 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 PTPRBP23467 1997 aa16.14■□□□□ 0.17
CLDN4-201ENST00000340958 TCRBV16S1A1N1A0A5B0 115 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ETS2P15036 469 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF28P17035 718 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ITGA2P17301 1181 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 TNFRSF1BP20333 461 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 S1PR1P21453 382 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 RORAP35398 523 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ARHGDIAP52565 204 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 POU6F2P78424 691 aaPredicted RBP16.13■□□□□ 0.17
CLDN4-201ENST00000340958 CHRNEQ04844 493 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 NRF1Q16656 503 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ISXQ2M1V0 245 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ARHGAP11BQ3KRB8 267 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 DCST2Q5T1A1 773 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 HMGN2P46Q86SG4 172 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 OR7G1Q8NGA0 311 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 PTPMT1Q8WUK0 201 aaPredicted RBP16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ART5Q96L15 291 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 DEPDC7Q96QD5 511 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 ABCG2Q9UNQ0 655 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 WDR45Q9Y484 360 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 PCDHGA8Q9Y5G5 932 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 GPC6Q9Y625 555 aaPredicted RBP16.13■□□□□ 0.17
CLDN4-201ENST00000340958 AK5Q9Y6K8 562 aa16.13■□□□□ 0.17
CLDN4-201ENST00000340958 IDSB3KWA1 339 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 C9J4A7 227 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 DIRAS1O95057 198 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 AK1P00568 194 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 EMDP50402 254 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 VLDLRP98155 873 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 FUT7Q11130 342 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 FOXC1Q12948 553 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 DUSP8Q13202 625 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 GPR68Q15743 365 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 DUSP7Q16829 419 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF311Q5JNZ3 666 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 CCNJQ5T5M9 372 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 HEPHL1Q6MZM0 1159 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 FIGNL1Q6PIW4 674 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ZDHHC13Q8IUH4 622 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 OR14A16Q8NHC5 309 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 TMBIM1Q969X1 311 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 QRSL1Q9H0R6 528 aaKnown RBP16.12■□□□□ 0.17
CLDN4-201ENST00000340958 Q9N2J8 555 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 COPS7AQ9UBW8 275 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 MKLN1Q9UL63 735 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 OR10H1Q9Y4A9 318 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 ASPMQ8IZT6 3477 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 IGLV3-12A0A075B6K2 115 aa16.12■□□□□ 0.17
CLDN4-201ENST00000340958 PDLIM1O00151 329 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms