RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 OR13C4Q8NGS5 318 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 SDCBP2Q9H190 292 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 B4GALT5O43286 388 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CSTAP01040 98 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 GLUD2P49448 558 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CD163Q86VB7 1156 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 KREMEN1Q96MU8 473 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 FAM120CQ9NX05 1096 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 DOCK11Q5JSL3 2073 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 LYRM1O43325 122 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 HTR3BO95264 441 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 HOXB5P09067 269 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SLC14A1Q13336 389 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 CNKSR3Q6P9H4 555 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 DBX2Q6ZNG2 339 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ZNF100Q8IYN0 542 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 IL17RCQ8NAC3 791 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 NKD2Q969F2 451 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 OR8D2Q9GZM6 311 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OSGIN2Q9Y236 505 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 NUBP2Q9Y5Y2 271 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ITGB2P05107 769 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ACPPP15309 386 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OPRL1P41146 370 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 HYAL4Q2M3T9 481 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OR51B5Q9H339 312 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OR51B6Q9H340 312 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 A0A0B4J2A0 478 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 IL10RBQ08334 325 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 GDPD1Q8N9F7 314 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SHPKQ9UHJ6 478 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ZFC3H1O60293 1989 aaKnown RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 TRPM6Q9BX84 2022 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ZNF207O43670 478 aaKnown RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 MTNR1AP48039 350 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 RPS18P62269 152 aaKnown RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 C4orf17Q53FE4 359 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 PGAP1Q75T13 922 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 GOLGA7Q7Z5G4 137 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SULF2Q8IWU5 870 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OR2T27Q8NH04 317 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 CYB5D2Q8WUJ1 264 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 IL26Q9NPH9 171 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 GPR52Q9Y2T5 361 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 CEBPZOSA8MTT3 80 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 TYRP1P17643 537 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 TAGLN2P37802 199 aaKnown RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 PLPP5Q8NEB5 264 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OR5AK2Q8NH90 309 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 MAFBQ9Y5Q3 323 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.457e-7■■□□□ 14.3
USP47-202ENST00000339865 UBE2G2P60604 165 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 VASNQ6EMK4 673 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 RNF170Q96K19 258 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SUCNR1Q9BXA5 334 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 NMNAT2Q9BZQ4 307 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 TMPRSS5Q9H3S3 457 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 GAREM1Q9H706 876 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 KRBA1A5PL33 1030 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 PENKP01210 267 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 OMGP23515 440 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 PPP2CAP67775 309 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 STK11Q15831 433 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 NNATQ16517 81 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ZNF74Q16587 644 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 TRIM61Q5EBN2 209 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 RAET1LQ5VY80 246 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OGFOD3Q6PK18 319 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 OR13J1Q8NGT2 312 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 FAM213BQ8TBF2 198 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 NPRL2Q8WTW4 380 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 MAL2Q969L2 176 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 ZNF514Q96K75 400 aaPredicted RBP12.24□□□□□ -0.45
USP47-202ENST00000339865 MAP3K3Q99759 626 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
USP47-202ENST00000339865 SERPINA5P05154 406 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CRYBB1P53674 252 aaPredicted RBP12.23□□□□□ -0.45
USP47-202ENST00000339865 ERVFC1P60507 584 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 ZNF718Q3SXZ3 478 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 NANOGP8Q6NSW7 305 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 PRICKLE2Q7Z3G6 844 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 PTCHD1Q96NR3 888 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 NANOGQ9H9S0 305 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SLAMF7Q9NQ25 335 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 GPR83Q9NYM4 423 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CACNG2Q9Y698 323 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 CDC42BPAQ5VT25 1732 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 PRSS51A0A1B0GVH4 220 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 D6RAR5 112 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 TSPAN6O43657 245 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 HOXA9P31269 272 aa12.23□□□□□ -0.45
USP47-202ENST00000339865 SLC18A1P54219 525 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms