RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 HIVEP1P15822 2718 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 MBD3L4A6NDZ8 208 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 MBD3L3A6NE82 208 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 MBD3L5A6NJ08 208 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 ERN1O75460 977 aaKnown RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 DNASE1P24855 282 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 GCAP28676 217 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 SOX18P35713 384 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 RAE1P78406 368 aaKnown RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 SH2D4BQ5SQS7 431 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 POMZP3Q6PJE2 187 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 LARP4Q71RC2 724 aaKnown RBP eCLIP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 TRMT10CQ7L0Y3 403 aaKnown RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 CDC20BQ86Y33 519 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 SAMD14Q8IZD0 417 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 WDSUB1Q8N9V3 476 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 C9orf106Q8NAJ2 232 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 MBD3L2Q8NHZ7 208 aaPredicted RBP17.69■□□□□ 0.42
ITGA4-202ENST00000339307 LINC01560Q8TB33 94 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 ZPLD1Q8TCW7 415 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 BBS4Q96RK4 519 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 TUBA1CQ9BQE3 449 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 ST6GALNAC2Q9UJ37 374 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 DKKL1Q9UK85 242 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 CBLCQ9ULV8 474 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 OR10H1Q9Y4A9 318 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 SPG11Q96JI7 2443 aa17.69■□□□□ 0.42
ITGA4-202ENST00000339307 KIAA1549Q9HCM3 1950 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 OR6C70A6NIJ9 312 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 ABHD2P08910 425 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 ANXA4P09525 319 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 PYGBP11216 843 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 TIA1P31483 386 aaKnown RBP eCLIP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 MPIP34949 423 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 CPA2P48052 419 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 STARP49675 285 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 PRKAA2P54646 552 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 LCP2Q13094 533 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 TMEM81Q6P7N7 255 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 PLXDC2Q6UX71 529 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 LUZP2Q86TE4 346 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 PLCZ1Q86YW0 608 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 SLC44A2Q8IWA5 706 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 FAM9CQ8IZT9 166 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 CHDHQ8NE62 594 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 ZNF675Q8TD23 568 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 NINJ1Q92982 152 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 EFHD2Q96C19 240 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 MID1IP1Q9NPA3 183 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 SLC35C2Q9NQQ7 365 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
ITGA4-202ENST00000339307 RPH3AQ9Y2J0 694 aaPredicted RBP17.68■□□□□ 0.42
ITGA4-202ENST00000339307 TO15178 435 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 RIPK2O43353 540 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 ABCB7O75027 752 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 CRCPO75575 148 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 ENO1P06733 434 aaKnown RBP17.67■□□□□ 0.42
ITGA4-202ENST00000339307 CD99P14209 185 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 SLCO1A2P46721 670 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 PKNOX1P55347 436 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 C2orf80Q0P641 193 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 ZNF155Q12901 538 aaPredicted RBP17.67■□□□□ 0.42
ITGA4-202ENST00000339307 EFR3AQ14156 821 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 IMPG1Q17R60 797 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 FBXL19-AS1Q494R0 122 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 AAGABQ6PD74 315 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 LCA5Q86VQ0 697 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 INTS12Q96CB8 462 aaKnown RBP17.67■□□□□ 0.42
ITGA4-202ENST00000339307 DTNBP1Q96EV8 351 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 SFXN2Q96NB2 322 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 YIPF4Q9BSR8 244 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 OR2B2Q9GZK3 357 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 FOLH1BQ9HBA9 442 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 MIEF1Q9NQG6 463 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 TAS2R9Q9NYW1 312 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 FBXL2Q9UKC9 423 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 WIF1Q9Y5W5 379 aa17.67■□□□□ 0.42
ITGA4-202ENST00000339307 CT45A8P0DMV1 189 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 CT45A9P0DMV2 189 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 CPN1P15169 458 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 PPP2R2AP63151 447 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 FOXF2Q12947 444 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 CT45A2Q5DJT8 189 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 BTBD9Q96Q07 612 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 TM9SF2Q99805 663 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 FOXC2Q99958 501 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 RHOXF2Q9BQY4 288 aa17.66■□□□□ 0.42
ITGA4-202ENST00000339307 RBM24Q9BX46 236 aaKnown RBP17.66■□□□□ 0.42
ITGA4-202ENST00000339307 PSMC3IPQ9P2W1 217 aaPredicted RBP17.66■□□□□ 0.42
ITGA4-202ENST00000339307 CLCA1A8K7I4 914 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 JUNP05412 331 aaKnown RBP17.65■□□□□ 0.42
ITGA4-202ENST00000339307 EPXP11678 715 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 SRD5A2P31213 254 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 NCBP2P52298 156 aaKnown RBP eCLIP17.65■□□□□ 0.42
ITGA4-202ENST00000339307 SLC29A2Q14542 456 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 NPSR1Q6W5P4 371 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 CHMP1BQ7LBR1 199 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 P4HA3Q7Z4N8 544 aa17.65■□□□□ 0.42
ITGA4-202ENST00000339307 GCNT2Q8N0V5 402 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms