RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NDUFS4O43181 175 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TPST2O60704 377 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 GPX5O75715 221 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CER1O95813 267 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TP53P04637 393 aaPredicted RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 BCHEP06276 602 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 IFI6P09912 130 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CPEP16870 476 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TNFRSF1BP20333 461 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 GALP22466 123 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 PBLDP30039 288 aaPredicted RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 RPS5P46782 204 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 CSNK1EP49674 416 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 XKP51811 444 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 AFF3P51826 1226 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 NUDT6P53370 316 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CRISP3P54108 245 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 MANFP55145 182 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 ZNF91Q05481 1191 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 DNASE1L3Q13609 305 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SPHARQ15513 63 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CEBPEQ15744 281 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TSTQ16762 297 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 HLA-BQ31612 363 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 KLHL22Q53GT1 634 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 C9orf64Q5T6V5 341 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 ATAD3BQ5T9A4 648 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 AGAP6Q5VW22 663 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 METRNLQ641Q3 311 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 USP30Q70CQ3 517 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 C6orf120Q7Z4R8 191 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 LRRTM4Q86VH4 590 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 AMZ2Q86W34 360 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 OR52J3Q8NH60 311 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SUN3Q8TAQ9 357 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SLC35B4Q969S0 331 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SLC35G5Q96KT7 338 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SLC6A18Q96N87 628 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 AGAP4Q96P64 663 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 ORAI3Q9BRQ5 295 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CHCHD6Q9BRQ6 235 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 FAIM2Q9BWQ8 316 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 PINK1Q9BXM7 581 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SLAMF7Q9NQ25 335 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 SEMA3GQ9NS98 782 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 MED17Q9NVC6 651 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 CALML5Q9NZT1 146 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 TESQ9UGI8 421 aaKnown RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 SERGEFQ9UGK8 458 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 KLF15Q9UIH9 416 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 PCOLCE2Q9UKZ9 415 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 A4GNTQ9UNA3 340 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 ITM2BQ9Y287 266 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 ASF1AQ9Y294 204 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 FAM208BQ5VWN6 2430 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 A0A0G2JPF8 293 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 TRBV4-1A0A0J9YWV2 114 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 A0A1W2PPV9 198 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 HNRNPCL2B2RXH8 293 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 HNRNPCL3B7ZW38 293 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 KMOO15229 486 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 LZTS3O60299 673 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 ENTPD6O75354 484 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CSO75390 466 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 KCNK2O95069 426 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 RAB36O95755 333 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 IGHV4-34P06331 123 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 FTH1P19P0C7X4 201 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 HNRNPCL4P0DMR1 293 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CFL1P23528 166 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 CD27P26842 260 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 IFNGR2P38484 337 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CASP3P42574 277 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CRYBB2P43320 205 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 PCYT1AP49585 367 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 RORCP51449 518 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 ABATP80404 500 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CDK5Q00535 292 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 ACSM1Q08AH1 577 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 RAB40BQ12829 278 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 TPBGQ13641 420 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 MED22Q15528 200 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 CST6Q15828 149 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 ZIC1Q15915 447 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 ZNF544Q6NX49 715 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 HSDL2Q6YN16 418 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 DBX2Q6ZNG2 339 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 GLRX5Q86SX6 157 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 OR56A1Q8NGH5 318 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 OR5AK3PQ8NH89 298 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 BAHD1Q8TBE0 780 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 ADAMTS14Q8WXS8 1223 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 ZCCHC14Q8WYQ9 949 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 TFGQ92734 400 aaPredicted RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 HPS1Q92902 700 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
RTN3-201ENST00000338850 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
RTN3-201ENST00000338850 OR5M11Q96RB7 305 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms