RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 WDFY3Q8IZQ1 3526 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FCMRO60667 390 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ALOX12BO75342 701 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 STK17BO94768 372 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NKX2-2O95096 273 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LDLRP01130 860 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CDK4P11802 303 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TNFRSF1BP20333 461 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EMP2P54851 167 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HPCAP84074 193 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PSG6Q00889 435 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNHIT3Q15649 155 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ATP6AP1Q15904 470 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CCNJQ5T5M9 372 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OGFRL1Q5TC84 451 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PRAMEF8Q5VWM4 474 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PRAMEF7Q5VXH5 474 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 KRT73Q86Y46 540 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ICA1LQ8NDH6 482 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OR7G1Q8NGA0 311 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HOXB13Q92826 284 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DAZLQ92904 295 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FBXL20Q96IG2 436 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 VSTM2LQ96N03 204 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SDF2Q99470 211 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZPBPQ9BS86 351 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RSPO3Q9BXY4 272 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IL1RAPQ9NPH3 570 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CALML5Q9NZT1 146 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SEC14L3Q9UDX4 400 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C3orf18Q9UK00 162 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PCDHGB3Q9Y5G1 929 aa13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GPC6Q9Y625 555 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IGHV3-20A0A0C4DH32 117 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GXYLT2A0PJZ3 443 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 hCG_2039718K7EN88 272 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CLOCKO15516 846 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SERPINB7O75635 380 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZIC2O95409 532 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DDAH2O95865 285 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CST1P01037 141 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FABP3P05413 133 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ETS2P15036 469 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 HOXB6P17509 224 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CD247P20963 164 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SLC5A2P31639 672 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LIMK1P53667 647 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VLDLRP98155 873 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GRAMD1BQ3KR37 738 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IFI44LQ53G44 452 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C3orf38Q5JPI3 329 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ANKRD37Q7Z713 158 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR14A16Q8NHC5 309 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF721Q8TF20 911 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BTBD2Q9BX70 525 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MKLN1Q9UL63 735 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KNTC1P50748 2209 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SYNDIG1LA6NDD5 238 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C9J4A7 227 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DKK1O94907 266 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IGKV3-11P04433 115 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MAGEA2P43356 314 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR1E2P47887 323 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SLC37A1P57057 533 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 POU6F2P78424 691 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SFT2D3Q587I9 215 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FAM69BQ5VUD6 431 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FAM198BQ6UWH4 519 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NPSR1Q6W5P4 371 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF517Q6ZMY9 492 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FRRS1Q6ZNA5 592 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GPR32P1Q8NGA4 272 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 WDR36Q8NI36 951 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VPS50Q96JG6 964 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 WDR54Q9H977 334 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 FBXO34Q9NWN3 711 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PRODH2Q9UF12 536 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SATB2Q9UPW6 733 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SH3GLB1Q9Y371 365 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 WDR45Q9Y484 360 aa13.7□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DSPPQ9NZW4 1301 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms