RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 TMPRSS11DO60235 418 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 B4GALT2O60909 372 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 OPRD1P41143 372 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 MAP2K3P46734 347 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 HNRNPA0Q13151 305 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 GPM6BQ13491 265 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 TEAD4Q15561 434 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 ZNF750Q32MQ0 723 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 PSRC1Q6PGN9 363 aaPredicted RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 KIF18BQ86Y91 864 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 LINC01555Q8NAE3 123 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 OR11H4Q8NGC9 324 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 OR5D16Q8NGK9 328 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 DNAJA4Q8WW22 397 aaPredicted RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 MYNNQ9NPC7 610 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 BRWD1Q9NSI6 2320 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 SOX14O95416 240 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 PTX3P26022 381 aaPredicted RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 RPL35P42766 123 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 LIMK1P53667 647 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 PRKAG1P54619 331 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 PDE7AQ13946 482 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 FCN2Q15485 313 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 GTPBP2Q9BX10 602 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 DPEP2Q9H4A9 486 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 ANKRA2Q9H9E1 313 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 CORO2BQ9UQ03 480 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 PADI2Q9Y2J8 665 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 A0A1W2PS29 197 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 SIGLEC5O15389 551 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 RB1P06400 928 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 ARSBP15848 533 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 CPN2P22792 545 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 HLA-DMAP28067 261 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 GJA4P35212 333 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 RRAS2P62070 204 aaPredicted RBP13.08□□□□□ -0.32
SF1-202ENST00000334944 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 P2RY14Q15391 338 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 KHDRBS2Q5VWX1 349 aaKnown RBP13.08□□□□□ -0.32
SF1-202ENST00000334944 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 LRRTM4Q86VH4 590 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 MEX3DQ86XN8 651 aaKnown RBP13.08□□□□□ -0.32
SF1-202ENST00000334944 DCUN1D3Q8IWE4 304 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 LINC00469Q8N7U9 141 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 OR10Z1Q8NGY1 313 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 EPYCQ99645 322 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 BRD7Q9NPI1 651 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 COMMD3Q9UBI1 195 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 DUSP12Q9UNI6 340 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 RFXAPO00287 272 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 KAT7O95251 611 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 SLC35G4P0C7Q5 338 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 RORCP51449 518 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 DPTQ07507 201 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 FGL2Q14314 439 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 PUM1Q14671 1186 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■□□□□ 9.8
SF1-202ENST00000334944 VITQ6UXI7 678 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 KLHDC8AQ8IYD2 350 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 SLC38A5Q8WUX1 472 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 WDR34Q96EX3 536 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 ZNF226Q9NYT6 803 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 ELF5Q9UKW6 265 aaPredicted RBP13.08□□□□□ -0.32
SF1-202ENST00000334944 SCN2AQ99250 2005 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 KIAA1549LQ6ZVL6 1849 aa13.08□□□□□ -0.32
SF1-202ENST00000334944 A0A1W2PRG6 482 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 RFPL3O75679 317 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 PBX2P40425 430 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 EXOSC2Q13868 293 aaKnown RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 C9orf50Q5SZB4 431 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 HDDC3Q8N4P3 179 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 OXR1Q8N573 874 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 AQP11Q8NBQ7 271 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 FBXO15Q8NCQ5 510 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 OR9Q1Q8NGQ5 310 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 TM4SF18Q96CE8 201 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 ZNF514Q96K75 400 aaPredicted RBP13.07□□□□□ -0.32
SF1-202ENST00000334944 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 KLHL31Q9H511 634 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 LHX9Q9NQ69 397 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 ACER3Q9NUN7 267 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 GPR34Q9UPC5 381 aa13.07□□□□□ -0.32
SF1-202ENST00000334944 YARS2Q9Y2Z4 477 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms