RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 METTL27Q8N6F8 245 aaPredicted RBP11.15□□□□□ -0.63
HDAC6-201ENST00000334136 ZFP41Q8N8Y5 198 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 HUS1BQ8NHY5 278 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 RNF31Q96EP0 1072 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 LRRC61Q9BV99 259 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 PELI2Q9HAT8 420 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 ZCCHC3Q9NUD5 404 aaKnown RBP11.15□□□□□ -0.63
HDAC6-201ENST00000334136 CD300AQ9UGN4 299 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 MAN2B2Q9Y2E5 1009 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 IGLV3-16A0A075B6K0 115 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 C12orf71A8MTZ7 269 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 B4GALT2O60909 372 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 FHP07954 510 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 MLLT10P55197 1068 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 EXOC3L2Q2M3D2 409 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 ALDH16A1Q8IZ83 802 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 SLC5A8Q8N695 610 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 MR1Q95460 341 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 GAL3ST1Q99999 423 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 UCK2Q9BZX2 261 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 GPN2Q9H9Y4 310 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 SMURF1Q9HCE7 757 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 TNFRSF12AQ9NP84 129 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PHF11Q9UIL8 331 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PCDHGA3Q9Y5H0 932 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 FCER2P06734 321 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 SSTR4P31391 388 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PIGAP37287 484 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 STARP49675 285 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.634e-7■■■■□ 22.9
HDAC6-201ENST00000334136 SPHARQ15513 63 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 SHQ1Q6PI26 577 aaKnown RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 TTLL10Q6ZVT0 673 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 RNF130Q86XS8 419 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 EGLN2Q96KS0 407 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 NLKQ9UBE8 527 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 ACSL6Q9UKU0 697 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 CMAHPQ9Y471 501 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 POLR1CO15160 346 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 RPS17P08708 135 aaKnown RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 HOXC4P09017 264 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 CLK3P49761 638 aaKnown RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 ARL9Q6T311 187 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 FAM86B1Q8N7N1 296 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PAPD5Q8NDF8 572 aaKnown RBP11.14□□□□□ -0.63
HDAC6-201ENST00000334136 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 OR52A5Q9H2C5 316 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 ANKMY1Q9P2S6 941 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 PLCL2Q9UPR0 1127 aa11.14□□□□□ -0.63
HDAC6-201ENST00000334136 INMT-MINDY4F8WBC2 141 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 DLGAP1O14490 977 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CHST10O43529 356 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PTTG1O95997 202 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 HSD3B1P14060 373 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 HSD3B2P26439 372 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 RBMS1P29558 406 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 OR1D5P58170 312 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 TAS2R50P59544 299 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 DSTNP60981 165 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PMS2CLQ68D20 193 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ADAMTS15Q8TE58 950 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ZNF431Q8TF32 576 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ZFPM2Q8WW38 1151 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 MRPL48Q96GC5 212 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 COX14Q96I36 57 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CMKLR1Q99788 373 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 AHCTF1Q8WYP5 2266 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PDPK1O15530 556 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 RYKP34925 604 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 HSF2Q03933 536 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 COL19A1Q14993 1142 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 GRHL2Q6ISB3 625 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 SPRED1Q7Z699 444 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 TICAM1Q8IUC6 712 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 UBE2FQ969M7 185 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 BAIAP2Q9UQB8 552 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PLXNA3P51805 1871 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 AGAP5A6NIR3 686 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CPNE6O95741 557 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CAPNS1P04632 268 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 KLHL22Q53GT1 634 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 ANKRD34AQ69YU3 496 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 IL22RA1Q8N6P7 574 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 OR2I1PQ8NGU4 316 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 CUEDC1Q9NWM3 386 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-201ENST00000334136 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 DLGAP4Q9Y2H0 992 aa11.13□□□□□ -0.63
HDAC6-201ENST00000334136 PCDHA9Q9Y5H5 950 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms