RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 C18orf63Q68DL7 685 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 PLAG1Q6DJT9 500 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 RAB11FIP2Q7L804 512 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 FATE1Q969F0 183 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SHARPINQ9H0F6 387 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 VPS29Q9UBQ0 182 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 GLS2Q9UI32 602 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 PCDHB7Q9Y5E2 793 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CCDC88CQ9P219 2028 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF840PA6NDX5 716 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 E7EQ34 232 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ADAM11O75078 769 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 RP2O75695 350 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CD160O95971 181 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 IGLV3-27P01718 113 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SPP1P10451 314 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 AMD1P17707 334 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 CASP6P55212 293 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 GAB1Q13480 694 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TXNDC8Q6A555 127 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TMPRSS11BQ86T26 416 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 C11orf65Q8NCR3 313 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 FAM46DQ8NEK8 389 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 TMEM185AQ8NFB2 350 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SFT2D1Q8WV19 159 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 NSMAFQ92636 917 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 BRD9Q9H8M2 597 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 ZNF226Q9NYT6 803 aa11.22□□□□□ -0.61
LIMK2-202ENST00000333611 SDC3O75056 442 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 TRIM3O75382 744 aaPredicted RBP11.21□□□□□ -0.61
LIMK2-202ENST00000333611 HLA-EP13747 358 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 GABRB1P18505 474 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 EPORP19235 508 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 PTBP1P26599 531 aaKnown RBP eCLIP11.21□□□□□ -0.61
LIMK2-202ENST00000333611 ALDH9A1P49189 494 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 GZMMP51124 257 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 BEX5Q5H9J7 111 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 LYPD4Q6UWN0 246 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 CBLL1Q75N03 491 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 ADGRF3Q8IZF5 1079 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 C9orf43Q8TAL5 461 aaPredicted RBP11.21□□□□□ -0.61
LIMK2-202ENST00000333611 TM9SF4Q92544 642 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 UPF1Q92900 1129 aaKnown RBP eCLIP11.21□□□□□ -0.614e-8■■■□□ 16.8
LIMK2-202ENST00000333611 UCN3Q969E3 161 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 C3orf49Q96BT1 292 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 CMTM7Q96FZ5 175 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 HRASLS5Q96KN8 279 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 SPHK1Q9NYA1 384 aa11.21□□□□□ -0.61
LIMK2-202ENST00000333611 SIGLEC6O43699 453 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 PRAMEF4O60810 478 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 C6orf47O95873 294 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CBSLP0DN79 551 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CBSP35520 551 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 NSG1P42857 185 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 MRPL19P49406 292 aaKnown RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 FLT3LGP49771 235 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 XKP51811 444 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 PTGES3Q15185 160 aaKnown RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 ZNF124Q15973 351 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 SLC5A12Q1EHB4 618 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 PRAMEF9Q5VWM5 478 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CDH26Q8IXH8 852 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 AUTS2Q8WXX7 1259 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 PEX11GQ96HA9 241 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 TSSK6Q9BXA6 273 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CFAP97Q9P2B7 532 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 ASF1AQ9Y294 204 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 GABRR3A8MPY1 467 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 HTR3BO95264 441 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 TGFB1P01137 390 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 H2AFB2P0C5Z0 115 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 PTNP21246 168 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 FPR3P25089 353 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 BDKRB1P46663 353 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 KCNJ5P48544 419 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 S100A12P80511 92 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 POU4F2Q12837 409 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 DOC2BQ14184 412 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 NUMA1Q14980 2115 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 ZXDCQ2QGD7 858 aaPredicted RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 GLYR1Q49A26 553 aaPredicted RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 CCSMST1Q4G0I0 132 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 MZT2AQ6P582 158 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 SPAG16Q8N0X2 631 aa11.21□□□□□ -0.62
LIMK2-202ENST00000333611 LILRA3Q8N6C8 439 aaPredicted RBP11.21□□□□□ -0.62
LIMK2-202ENST00000333611 NEIL3Q8TAT5 605 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms