RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CAMKMTQ7Z624 323 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 VPS37AQ8NEZ2 397 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 C7orf26Q96N11 449 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 COL21A1Q96P44 957 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 ANGPTL4Q9BY76 406 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 WDR55Q9H6Y2 383 aaPredicted RBP12.87□□□□□ -0.35
LIMS1-201ENST00000332345 METTL7AQ9H8H3 244 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 Q9N2J8 555 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 TUBA8Q9NY65 449 aaPredicted RBP12.87□□□□□ -0.35
LIMS1-201ENST00000332345 SLC5A6Q9Y289 635 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
LIMS1-201ENST00000332345 A0A0G2JMM0 328 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 GOLGA8QA0A0J9YX86 632 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 A0A1W2PPB8 328 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CLEC18AA5D8T8 446 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 GOLGA8OA6NCC3 632 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 FAM166BA8MTA8 275 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 KIR3DP1A8MWS1 328 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 GOLGA8NF8WBI6 632 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CFLARO15519 480 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CDC40O60508 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 NME6O75414 186 aaPredicted RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 WISP2O76076 250 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 SOX30O94993 753 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 TGDSO95455 350 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 STSP08842 583 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 IL12BP29460 328 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CDK9P50750 372 aaKnown RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CLNS1AP54105 237 aaKnown RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 PSMD4P55036 377 aaKnown RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 PSG6Q00889 435 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 GAB1Q13480 694 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 DECR1Q16698 335 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CMPK2Q5EBM0 449 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 TMEM81Q6P7N7 255 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 SZRD1Q7Z422 152 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 SPPL2CQ8IUH8 684 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 FAM109AQ8N4B1 249 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CLEC18CQ8NCF0 446 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 OR8J2Q8NGG1 315 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 OR52N2Q8NGI0 321 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 ACTRT2Q8TDY3 377 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 HGDQ93099 445 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 RILPQ96NA2 401 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 LMF2Q9BU23 707 aaKnown RBP12.86□□□□□ -0.35
LIMS1-201ENST00000332345 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 PROK2Q9HC23 129 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 EQTNQ9NQ60 294 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 CBLCQ9ULV8 474 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 PCDHGB4Q9UN71 923 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 DNAJC13O75165 2243 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 MYO7BQ6PIF6 2116 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 FLNCQ14315 2725 aa12.86□□□□□ -0.35
LIMS1-201ENST00000332345 TSPAN2O60636 221 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 SLC19A2O60779 497 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 UGT2B11O75310 529 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 TRIM3O75382 744 aaPredicted RBP12.85□□□□□ -0.35
LIMS1-201ENST00000332345 PDE9AO76083 593 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 EFNA1P20827 205 aaPredicted RBP12.85□□□□□ -0.35
LIMS1-201ENST00000332345 GABRA3P34903 492 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 KIR3DL1P43629 444 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 CCT3P49368 545 aaKnown RBP12.85□□□□□ -0.35
LIMS1-201ENST00000332345 PRIM2P49643 509 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 DPY19L1Q2PZI1 675 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 C4orf17Q53FE4 359 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ANXA8L1Q5VT79 327 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 SLC30A6Q6NXT4 461 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 BHLHB9Q6PI77 547 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 TMEM251Q8N6I4 163 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 NUDT8Q8WV74 236 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 CKAP2Q8WWK9 683 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 TESCQ96BS2 214 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 MOAP1Q96BY2 351 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 SLC35A4Q96G79 324 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 MAGEB18Q96M61 343 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 MS4A4EQ96PG1 132 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
LIMS1-201ENST00000332345 AIG1Q9NVV5 245 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 ZNF835Q9Y2P0 537 aa12.85□□□□□ -0.35
LIMS1-201ENST00000332345 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms