RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ALOX12BO75342 701 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 SCRG1O75711 98 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 SOX14O95416 240 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 CER1O95813 267 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 PCSK2P16519 638 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 FBLP22087 321 aaKnown RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 NUDT1P36639 197 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 ARSFP54793 590 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 RGS8P57771 180 aaPredicted RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 COPZ1P61923 177 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 RSBN1Q5VWQ0 802 aaPredicted RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 C16orf47Q6ZP98 133 aaPredicted RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 SPARTQ8N0X7 666 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 CREB3L4Q8TEY5 395 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 CDS1Q92903 461 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 EFHD2Q96C19 240 aaPredicted RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 ZNF556Q9HAH1 456 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 TMCC3Q9ULS5 477 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 DAPP1Q9UN19 280 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 ABCB7O75027 752 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 LDOC1O95751 146 aaPredicted RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 FADS2O95864 444 aaKnown RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 FCGR1AP12314 374 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 CCL4P13236 92 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 TMBIM6P55061 237 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 UBE2IP63279 158 aaKnown RBP14.89□□□□□ -0.03
PDGFB-201ENST00000331163 DUSP2Q05923 314 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 IQCHQ86VS3 1027 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 GALNT12Q8IXK2 581 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 PACRGLQ8N7B6 248 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 OR5P2Q8WZ92 322 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 AMDHD1Q96NU7 426 aa14.89□□□□□ -0.03
PDGFB-201ENST00000331163 C2orf72A6NCS6 295 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 SNPHO15079 494 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 GKN3PP0CG01 181 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 RRM2P31350 389 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 IFNA8P32881 189 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 FBXW4P57775 412 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 MRPS15P82914 257 aaKnown RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 LAPTM4BQ86VI4 370 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 PROSER1Q86XN7 944 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 TMEM52Q8NDY8 209 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 EDEM2Q9BV94 578 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 BHLHE41Q9C0J9 482 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 GPN3Q9UHW5 284 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 ERVK-11Q9UQG0 969 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 WDR45Q9Y484 360 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 NOX1Q9Y5S8 564 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 KCNE3Q9Y6H6 103 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 HYAL3O43820 417 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 CAPNS1P04632 268 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 UMPSP11172 480 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 CD1CP29017 333 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 COLEC12Q5KU26 742 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 RORBQ92753 470 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 RPL3LQ92901 407 aaKnown RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 TESCQ96BS2 214 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 TCTN2Q96GX1 697 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 NODALQ96S42 347 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 CTSFQ9UBX1 484 aa14.88□□□□□ -0.03
PDGFB-201ENST00000331163 NUP210Q8TEM1 1887 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-201ENST00000331163 OR2A25A4D2G3 310 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 FABP3P05413 133 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 TEAD1P28347 426 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 CLK1P49759 484 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 OXA1LQ15070 435 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 MPEG1Q2M385 716 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ZNF607Q96SK3 696 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 DUSP23Q9BVJ7 150 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ULBP3Q9BZM4 244 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 NEUROD4Q9HD90 331 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 SERHLQ9NQF3 203 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 KLHL28Q9NXS3 571 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 SAMD4AQ9UPU9 718 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 IFNA14P01570 189 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 FHP07954 510 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 DBTP11182 482 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 UQCRC2P22695 453 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 HRH2P25021 359 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 GTF2E2P29084 291 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 CTSKP43235 329 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 ZNF311Q5JNZ3 666 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 UBE2UQ5VVX9 321 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 RBM45Q8IUH3 476 aaKnown RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 OR52R1Q8NGF1 315 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 SERINC2Q96SA4 455 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 MESP1Q9BRJ9 268 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 MENTQ9BUN1 341 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 C17orf105B2RV13 164 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 MASP2O00187 686 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 HRKO00198 91 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 TAF4O00268 1085 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 OPN1LWP04000 364 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 GPIP06744 558 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 KLK3P07288 261 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-201ENST00000331163 HEXBP07686 556 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 OTX2P32243 289 aa14.87□□□□□ -0.03
PDGFB-201ENST00000331163 PIGAP37287 484 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms