RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 IMP4Q96G21 291 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 HBEGFQ99075 208 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 FEVQ99581 238 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ATF6BQ99941 703 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SPATA5L1Q9BVQ7 753 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ARL6Q9H0F7 186 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 CXCL16Q9H2A7 254 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ATXN3LQ9H3M9 355 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 MARCH4Q9P2E8 410 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 DLGAP4Q9Y2H0 992 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SNX10Q9Y5X0 201 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 A0A1B0GVC2 190 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ABHD14A-ACY1A0A1B0GW23 586 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 A6NIN4 97 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 H7C0S8 307 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 J3KR12 359 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ARPC5O15511 151 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 EEF1E1O43324 174 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SMIM10L2AP0DMW4 78 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SMIM10L2BP0DMW5 78 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 NFYBP25208 207 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 RGS19P49795 217 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 AP1S1P61966 158 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 GABREP78334 506 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 PRR5P85299 388 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 TSNQ15631 228 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 SLC39A12Q504Y0 691 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 ATG9BQ674R7 924 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 RAET1GQ6H3X3 334 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 GSG1LQ6UXU4 331 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 NAXDQ8IW45 347 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 POMGNT2Q8NAT1 580 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 FAM120BQ96EK7 910 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 AARSD1Q9BTE6 412 aaKnown RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 TEX12Q9BXU0 123 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 RLIMQ9NVW2 624 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 NFKBIL1Q9UBC1 381 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-201ENST00000328923 PRKAB1Q9Y478 270 aa11.19□□□□□ -0.62
SHMT2-201ENST00000328923 LOC285095A0A1B0GVY8 99 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GABRR3A8MPY1 467 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ZNF879B4DU55 563 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CLDN5O00501 218 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 PRAMEF2O60811 474 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ECI2O75521 394 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 KHDRBS3O75525 346 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 OR8U8P0C7N1 319 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GNSP15586 552 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 PPP3CBP16298 524 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 AKT1P31749 480 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 HTR5AP47898 357 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 STARD6P59095 220 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 UBXN2BQ14CS0 331 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CCL14Q16627 93 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 SLC27A1Q6PCB7 646 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 LYPD4Q6UWN0 246 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 Q6ZSR9 355 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 Q6ZTK2 550 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CALHM3Q86XJ0 350 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GPR26Q8NDV2 337 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CHFRQ96EP1 664 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ZC3H10Q96K80 434 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ENAMQ9NRM1 1142 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GDE1Q9NZC3 331 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CNOT2Q9NZN8 540 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 PIPOXQ9P0Z9 390 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 PPP4R1LQ9P1A2 415 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 OR10H1Q9Y4A9 318 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 FAM221BA6H8Z2 402 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 RTCAO00442 366 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ZNF593O00488 134 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ZNF197O14709 1029 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 RAD1O60671 282 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GPR32O75388 356 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 ACPPP15309 386 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 TM4SF4P48230 202 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 CLDN8P56748 225 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 RAB2AP61019 212 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 UBE2IP63279 158 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 OR5M10Q6IEU7 315 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 SEZ6L2Q6UXD5 910 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 LDB1Q86U70 411 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 MISPQ8IVT2 679 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 SKA3Q8IX90 412 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 GPR65Q8IYL9 337 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 TMEM185AQ8NFB2 350 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 MRPL37Q9BZE1 423 aaKnown RBP11.18□□□□□ -0.62
SHMT2-201ENST00000328923 SLC39A8Q9C0K1 460 aa11.18□□□□□ -0.62
SHMT2-201ENST00000328923 BARX1Q9HBU1 254 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms