RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 KCTD7Q96MP8 289 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 HDHD5Q9BXW7 423 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 CASKO14936 926 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC31A1O15431 190 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 FCMRO60667 390 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ERGP11308 486 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 FRKP42685 505 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 CLDN2P57739 230 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 RGS8P57771 180 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 FLYWCH1Q4VC44 716 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 KLHL22Q53GT1 634 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF362Q5T0B9 420 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 BHLHB9Q6PI77 547 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 MORN4Q8NDC4 146 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ANKK1Q8NFD2 765 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 MS4A6EQ96DS6 147 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ARSGQ96EG1 525 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC38A2Q96QD8 506 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 OR7D2Q96RA2 312 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 C6orf106Q9H6K1 298 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 SEMA4GQ9NTN9 838 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC30A4O14863 429 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 APODP05090 189 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ALPPP05187 535 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CST6Q15828 149 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF544Q6NX49 715 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 TRIM48Q8IWZ4 208 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 OR4E2Q8NGC2 313 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 GIMAP4Q9NUV9 329 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ACSL5Q9ULC5 683 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 NARSO43776 548 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 TBX19O60806 448 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ASGR2P07307 311 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ATP5A1P25705 553 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ETV6P41212 452 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CDH11P55287 796 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 PRR5P85299 388 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SCN1BQ07699 218 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 INSL4Q14641 139 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ZNF791Q3KP31 576 aaPredicted RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 C1orf94Q6P1W5 598 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 PLEKHM3Q6ZWE6 761 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 KCT2Q8NC54 265 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 OR52P1PQ8NH57 321 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 OR14C36Q8NHC7 312 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SMAD5Q99717 465 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CTRCQ99895 268 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC6A20Q9NP91 592 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 FAM183AA6NL82 134 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 NCR1O76036 304 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CELP19835 753 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 IFNA8P32881 189 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 HTR3AP46098 478 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 RFX2P48378 723 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ID2Q02363 134 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CCDC85BQ15834 202 aaPredicted RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 NDUFA9Q16795 377 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 TJAP1Q5JTD0 557 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ABHD17CQ6PCB6 329 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ZCCHC10Q8TBK6 192 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC25A46Q96AG3 418 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 PHOX2BQ99453 314 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 FUZQ9BT04 418 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 NDOR1Q9UHB4 597 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 CSNK1G3Q9Y6M4 447 aa13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
ATP2C1-201ENST00000328560 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 MSL3P1P0C860 447 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 MPIP34949 423 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TRHRP34981 398 aaPredicted RBP13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 FGL2Q14314 439 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 MTSS1LQ765P7 747 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TMEM163Q8TC26 289 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 UFD1Q92890 307 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 TBX5Q99593 518 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 HDAC8Q9BY41 377 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 CAPN10Q9HC96 672 aa13.18□□□□□ -0.3
ATP2C1-201ENST00000328560 ADAM29Q9UKF5 820 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms