RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MID1O15344 667 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 NDUFB5O43674 189 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 SLC2A10O95528 541 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 PRKAR1AP10644 381 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 CPN2P22792 545 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 SEC13P55735 322 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 C6orf132Q5T0Z8 1188 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 CCNJQ5T5M9 372 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 PRICKLE2Q7Z3G6 844 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 NUP43Q8NFH3 380 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 OR4E2Q8NGC2 313 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 OR10G6Q8NH81 332 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 TM9SF4Q92544 642 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 A0A1W2PP55 124 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 ZC3H12DA2A288 527 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 VEGFDO43915 354 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 KLHL18O94889 574 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 ACADLP28330 430 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 TALDO1P37837 337 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 MAP2K3P46734 347 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 CDK3Q00526 305 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 V9GYH0 126 aa12.13□□□□□ -0.47
HMGCS1-201ENST00000325110 NPIPA5A0A0B4J1W7 369 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PRAMEF27A3QJZ7 478 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 NPIPA7E9PJI5 369 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PRODHO43272 600 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 HYAL3O43820 417 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 REM1O75628 298 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 CSF3P09919 207 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 NPIPA8P0DM63 369 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 AHRP35869 848 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 P2RY2P41231 377 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 GCGRP47871 477 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 LIMS1P48059 325 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 RFX2P48378 723 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SLC3A1Q07837 685 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 P2RY14Q15391 338 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 NKAIN4Q8IVV8 208 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 HDDC3Q8N4P3 179 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 ACOT4Q8N9L9 421 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 BBS1Q8NFJ9 593 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 OR5K2Q8NHB8 316 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 OR14C36Q8NHC7 312 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 ZFPM2Q8WW38 1151 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 KATNB1Q9BVA0 655 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 NXF2Q9GZY0 626 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 MAT2BQ9NZL9 334 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 MOSPD3O75425 235 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 ASGR2P07307 311 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 FABP5Q01469 135 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 ZNF793Q6ZN11 406 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 CPOQ8IVL8 374 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 MRPL43Q8N983 215 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SUN3Q8TAQ9 357 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SLC25A46Q96AG3 418 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 POLDIP3Q9BY77 421 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 DDX31Q9H8H2 851 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 RNF121Q9H920 327 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 TNFRSF10DQ9UBN6 386 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SPTBP11277 2137 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PIP5K1CO60331 668 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 FCMRO60667 390 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PIPP12273 146 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 FUT1P19526 365 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 CTBP2P56545 445 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 ST3GAL3Q11203 375 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 TRAM2Q15035 370 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 TATDN3Q17R31 274 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PLBD1Q6P4A8 553 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 VITQ6UXI7 678 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SAMD8Q96LT4 415 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 PRRC1Q96M27 445 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 TAPBPLQ9BX59 468 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 MBNL1Q9NR56 388 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 KCND3Q9UK17 655 aa12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 DIMT1Q9UNQ2 313 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 GPR55Q9Y2T6 319 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-201ENST00000325110 SOCS6O14544 535 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 LILRB5O75023 590 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 SEMA3DO95025 777 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 YES1P07947 543 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 BMP7P18075 431 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 GSTM3P21266 225 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 MPIP34949 423 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 SIM1P81133 766 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 COX10Q12887 443 aa12.11□□□□□ -0.47
HMGCS1-201ENST00000325110 GNA13Q14344 377 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms