RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PCOLCE2Q9UKZ9 415 aa20.97■□□□□ 0.95
PNKP-201ENST00000322344 SCAMP1O15126 338 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 PRODHO43272 600 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 SLC35G6P0C7Q6 338 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 CCNYL3P0C7X3 344 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 ALOX12P18054 663 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 MYL12AP19105 171 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 DEFA1P59665 94 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 DEFA3P59666 94 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 PPP2CBP62714 309 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 PPP2CAP67775 309 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 RAB40BQ12829 278 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 NFATC4Q14934 902 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 FAM214AQ32MH5 1076 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 C9orf50Q5SZB4 431 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 HEPHL1Q6MZM0 1159 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 ZNF730Q6ZMV8 503 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 VRK2Q86Y07 508 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 LRRC25Q8N386 305 aaPredicted RBP20.96■□□□□ 0.95
PNKP-201ENST00000322344 PIGXQ8TBF5 258 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 OR1E3Q8WZA6 343 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 MS4A4EQ96PG1 132 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 SRMSQ9H3Y6 488 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 SMURF1Q9HCE7 757 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 PRDM9Q9NQV7 894 aa20.96■□□□□ 0.95
PNKP-201ENST00000322344 BTN3A3O00478 584 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 AQP9O43315 295 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 UBXN7O94888 489 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 ACP2P11117 423 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 RORCP51449 518 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 SLC13A2Q13183 592 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 KIR2DS3Q14952 304 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 CDC73Q6P1J9 531 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 ENPP7Q6UWV6 458 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 USP30Q70CQ3 517 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 RRM2BQ7LG56 351 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 PHC2Q8IXK0 858 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 KCT2Q8NC54 265 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 GALNT6Q8NCL4 622 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 FAM83FQ8NEG4 500 aaPredicted RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 OR52P1PQ8NH57 321 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 WDR92Q96MX6 357 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 RPP25Q9BUL9 199 aaKnown RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 SAP130Q9H0E3 1048 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 CACYBPQ9HB71 228 aaKnown RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 ISYNA1Q9NPH2 558 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 ANKMY1Q9P2S6 941 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 NCKAP1Q9Y2A7 1128 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 AP3D1O14617 1153 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 ZNF888P0CJ79 500 aaPredicted RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 HOXB2P14652 356 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 GTF2E2P29084 291 aaKnown RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 SEPHS1P49903 392 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 COPZ1P61923 177 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 LSM11P83369 360 aaKnown RBP eCLIP20.95■□□□□ 0.941e-11■■■■■ 50.1
PNKP-201ENST00000322344 SUZ12Q15022 739 aaKnown RBP20.95■□□□□ 0.94
PNKP-201ENST00000322344 PRICKLE2Q7Z3G6 844 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 TOR1AIP2Q8NFQ8 470 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 KAT2AQ92830 837 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 SERINC2Q96SA4 455 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 SLC30A2Q9BRI3 323 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 PLA2G12AQ9BZM1 189 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 SEMA4GQ9NTN9 838 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 DOCK9Q9BZ29 2069 aa20.95■□□□□ 0.94
PNKP-201ENST00000322344 NINQ8N4C6 2090 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 POM121BA6NF01 834 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 URADA6NGE7 173 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 APBB3O95704 486 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 CPEP16870 476 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 CPN2P22792 545 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 RPS19P39019 145 aaKnown RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 STAT5AP42229 794 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 LTB4RQ15722 352 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 DECR1Q16698 335 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 TMEM44Q2T9K0 475 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 MINDY4Q4G0A6 757 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 MFSD12Q6NUT3 480 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 ACOT11Q8WXI4 607 aaPredicted RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 TM4SF19Q96DZ7 209 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 SLC35A4Q96G79 324 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 KCNS3Q9BQ31 491 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 TEX12Q9BXU0 123 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 EGLN3Q9H6Z9 239 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 ZNF624Q9P2J8 865 aaPredicted RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 PAIP2BQ9ULR5 123 aaKnown RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 TRAPPC4Q9Y296 219 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 GPR55Q9Y2T6 319 aaPredicted RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 A0A1W2PQF6 199 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 TMEM129A0AVI4 362 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 CPSF4LA6NMK7 179 aaKnown RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 EML2O95834 649 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 OMPP47874 163 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 RGS8P57771 180 aaPredicted RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 OR4K14Q8NGD5 310 aa20.94■□□□□ 0.94
PNKP-201ENST00000322344 MTHFD2LQ9H903 347 aaPredicted RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 EXOSC1Q9Y3B2 195 aaKnown RBP20.94■□□□□ 0.94
PNKP-201ENST00000322344 DOCK8Q8NF50 2099 aa20.93■□□□□ 0.94
PNKP-201ENST00000322344 MYO10Q9HD67 2058 aa20.93■□□□□ 0.94
PNKP-201ENST00000322344 KDM4EB2RXH2 506 aaPredicted RBP20.93■□□□□ 0.94
PNKP-201ENST00000322344 STK25O00506 426 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms