RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 NUDT7P0C024 238 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 TFPTP0C1Z6 253 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 CT45A8P0DMV1 189 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 CT45A9P0DMV2 189 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 PCGF2P35227 344 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 AP2B1P63010 937 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 CDK6Q00534 326 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 PSG6Q00889 435 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 TRAP1Q12931 704 aaKnown RBP12.61□□□□□ -0.39
PRPF18-201ENST00000320054 TRIM25Q14258 630 aaKnown RBP12.61□□□□□ -0.39
PRPF18-201ENST00000320054 GNA13Q14344 377 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 BTBD16Q32M84 506 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 CT45A2Q5DJT8 189 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 ATAD3BQ5T9A4 648 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 CHDHQ8NE62 594 aaPredicted RBP12.61□□□□□ -0.39
PRPF18-201ENST00000320054 OR5L2Q8NGL0 311 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 XAGE5Q8WWM1 108 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 THAP4Q8WY91 577 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 ASB9Q96DX5 294 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 LCORQ96JN0 433 aaPredicted RBP12.61□□□□□ -0.39
PRPF18-201ENST00000320054 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 PIF1Q9H611 641 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 ZNF160Q9HCG1 818 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 Q9N2J8 555 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 GMPR2Q9P2T1 348 aaKnown RBP12.61□□□□□ -0.39
PRPF18-201ENST00000320054 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 USP22Q9UPT9 525 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
PRPF18-201ENST00000320054 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ACACAQ13085 2346 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 FRG2CA6NGY1 282 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 A8MVJ9 347 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 TO15178 435 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ACOX3O15254 700 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 SERPINA7P05543 415 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 GABRA3P34903 492 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 TRHRP34981 398 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CORO7P57737 925 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 POU6F2P78424 691 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 SCARB2Q14108 478 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 MAPK11Q15759 364 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ARHGAP11BQ3KRB8 267 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CYP27C1Q4G0S4 372 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 PRAMEF8Q5VWM4 474 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 PRAMEF7Q5VXH5 474 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 COX18Q8N8Q8 333 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ZSCAN1Q8NBB4 408 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 FAM156AQ8NDB6 213 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 FBXO30Q8TB52 745 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 GPR151Q8TDV0 419 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 SLC38A5Q8WUX1 472 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CDS1Q92903 461 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 GATA6Q92908 595 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 OTUB1Q96FW1 271 aaPredicted RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 FER1L6-AS2Q96M78 137 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 TRNT1Q96Q11 434 aaKnown RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CCDC86Q9H6F5 360 aaKnown RBP12.6□□□□□ -0.39
PRPF18-201ENST00000320054 CALML5Q9NZT1 146 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 MAGEL2Q9UJ55 1249 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 POMPQ9Y244 141 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 KCNE3Q9Y6H6 103 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 APC2O95996 2303 aa12.6□□□□□ -0.39
PRPF18-201ENST00000320054 NINQ8N4C6 2090 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 PRAMEF27A3QJZ7 478 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 CDC14CA4D256 554 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 ZNF891A8MT65 544 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 ACOT8O14734 319 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 GSTA4O15217 222 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 CIB2O75838 187 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 SORBS2O94875 1100 aaKnown RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 CAPNS1P04632 268 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 NR2F1P10589 423 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 GGT1P19440 569 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 TCN1P20061 433 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 MSX2P35548 267 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 PIGAP37287 484 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 FUT5Q11128 374 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 H3F3CQ6NXT2 135 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 JMJD6Q6NYC1 403 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 CCDC80Q76M96 950 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 C16orf62Q7Z3J2 963 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 PROSER1Q86XN7 944 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
PRPF18-201ENST00000320054 KBTBD2Q8IY47 623 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 HIPK4Q8NE63 616 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 OR52E4Q8NGH9 312 aa12.59□□□□□ -0.39
PRPF18-201ENST00000320054 NFKBIDQ8NI38 313 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms