RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 RUNX1T1Q06455 604 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 LIPKQ5VXJ0 399 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 PLET1Q6UQ28 207 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 LCTLQ6UWM7 567 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 UNC5DQ6UXZ4 953 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF765Q7L2R6 523 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 C6orf120Q7Z4R8 191 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 OR8H1Q8NGG4 311 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 C9orf43Q8TAL5 461 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 COX14Q96I36 57 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 LINC00615Q96LM1 132 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 C1QTNF7Q9BXJ2 289 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 NIPAL2Q9H841 368 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 C12orf10Q9HB07 376 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 EIF3KQ9UBQ5 218 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 RWDD3Q9Y3V2 267 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 H0Y8X5 98 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 SLC28A2O43868 658 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 B4GALT2O60909 372 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ENTPD6O75354 484 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 OR12D1P0DN82 309 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 CNR2P34972 360 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 BSGP35613 385 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 SYPL1Q16563 259 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 SMPDL3AQ92484 453 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 UPRTQ96BW1 309 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 TEFMQ96QE5 360 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 MYADMQ96S97 322 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 PRR14Q9BWN1 585 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 MS4A8Q9BY19 250 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 QRSL1Q9H0R6 528 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 SFXN1Q9H9B4 322 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ANGPT4Q9Y264 503 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 PADI2Q9Y2J8 665 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 OR5K3A6NET4 321 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 EPOPA6NHQ4 379 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 NDUFS4O43181 175 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 ERI3O43414 337 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PLOD3O60568 738 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PDGFAP04085 211 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 ACADMP11310 421 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 NAGAP17050 411 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 DDCP20711 480 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PDE7AQ13946 482 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 MICAQ29983 383 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PTCHD4Q6ZW05 846 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC34A3Q8N130 599 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 LRRC20Q8TCA0 184 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 WDR34Q96EX3 536 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 MTIF3Q9H2K0 278 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 LHX9Q9NQ69 397 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 SPHK1Q9NYA1 384 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 POFUT2Q9Y2G5 429 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 C2orf16Q68DN1 1984 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 TRBV4-1A0A0J9YWV2 114 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 IQCMA0A1B0GVH7 501 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 A0A1W2PPV9 198 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 CCNB2O95067 398 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 AK4P27144 223 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PTGS2P35354 604 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 C21orf58P58505 322 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 HEPACAMQ14CZ8 416 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 SHHQ15465 462 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 TIGD3Q6B0B8 471 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 PHOSPHO2Q8TCD6 241 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 SETD7Q8WTS6 366 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 DPH7Q9BTV6 452 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 YARS2Q9Y2Z4 477 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 SPTBP11277 2137 aa14.64□□□□□ -0.07
SHROOM1-201ENST00000319854 IGKV1-8A0A0C4DH67 115 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 C5orf67F2Z3F1 127 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 GASTP01350 101 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 IFNW1P05000 195 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 APODP05090 189 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 P2RY14Q15391 338 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 NDUFAF5Q5TEU4 345 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 ADAMTSL4Q6UY14 1074 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 CCDC116Q8IYX3 515 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 FRMD1Q8N878 549 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 SLC25A46Q96AG3 418 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 METTL2AQ96IZ6 378 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 RSPO3Q9BXY4 272 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 HDAC8Q9BY41 377 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 MCOLN1Q9GZU1 580 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 TRIM45Q9H8W5 580 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 ACER3Q9NUN7 267 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 DOCK8Q8NF50 2099 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 ANHXE9PGG2 379 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 H3BN98 237 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 DPM1O60762 260 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 OR7A10O76100 309 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 CCT3P49368 545 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 LIM2P55344 173 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 CSNK1G2P78368 415 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 SPHARQ15513 63 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 C22orf42Q6IC83 251 aa14.63□□□□□ -0.07
SHROOM1-201ENST00000319854 REEP3Q6NUK4 255 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms