RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CAMKVQ8NCB2 501 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF485Q8NCK3 441 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 OR2T4Q8NH00 348 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SUN3Q8TAQ9 357 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 RBP7Q96R05 134 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF416Q9BWM5 594 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MTG2Q9H4K7 406 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZFR2Q9UPR6 939 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM5Q9Y2B1 443 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 GSTZ1O43708 216 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 B3GALNT1O75752 331 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 BCHEP06276 602 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CHRM5P08912 532 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 DRD2P14416 443 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 NFYAP23511 347 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 KHKP50053 298 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MMP15P51511 669 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MAP2K6P52564 334 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 RPS13P62277 151 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 POU4F3Q15319 338 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ELFN2Q5R3F8 820 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 COX20Q5RI15 118 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ATXN7L2Q5T6C5 722 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 RPL13AP3Q6NVV1 102 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C6orf120Q7Z4R8 191 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CMIPQ8IY22 773 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ECHDC3Q96DC8 303 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 NDC1Q9BTX1 674 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SAP130Q9H0E3 1048 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SUV39H2Q9H5I1 410 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C14orf105Q9NVL8 296 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 EVA1BQ9NVM1 165 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FBXW2Q9UKT8 454 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SLC6A14Q9UN76 642 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 PRELID3BQ9Y3B1 194 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 A0A0G2JPF8 293 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SNRPGP15A8MWD9 76 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 HNRNPCL2B2RXH8 293 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 HNRNPCL3B7ZW38 293 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ATP6V1G2-DDX39BF2Z307 99 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 H7C2Y5 167 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 J3KTA2 159 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FFAR1O14842 300 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 GATBO75879 557 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 HNRNPCL4P0DMR1 293 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 HTR1FP30939 366 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FEN1P39748 380 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ARFIP1P53367 373 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TRA2BP62995 288 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SLBPQ14493 270 aaKnown RBP eCLIP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CDKN3Q16667 212 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZXDCQ2QGD7 858 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TCTE1Q5JU00 501 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 NUDT13Q86X67 352 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 STPG2Q8N412 459 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SFXN2Q96NB2 322 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 RBCK1Q9BYM8 510 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 DLL4Q9NR61 685 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SDHAF2Q9NX18 166 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZMAT5Q9UDW3 170 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 YARS2Q9Y2Z4 477 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 PARP14Q460N5 1801 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FAM86C2PA6NEL3 165 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 E7EQ34 232 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CTDSPLO15194 276 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 RGS11O94810 467 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 IL3P08700 152 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ACSM4P0C7M7 580 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 FAUP35544 74 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZXDBP98169 803 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 BEX3Q00994 111 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 PTSQ03393 145 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ATP13A5Q4VNC0 1218 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CLVS2Q5SYC1 327 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TNFAIP8L2Q6P589 184 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM64Q6YI46 380 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 LHFPL3Q86UP9 236 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ACOT11Q8WXI4 607 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 GATAD2BQ8WXI9 593 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CPEB1Q9BZB8 566 aaKnown RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC6A16Q9GZN6 736 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 NANSQ9NR45 359 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR51B4Q9Y5P0 310 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TRABD2BA6NFA1 517 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SLC22A31A6NKX4 558 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 GPRIN2O60269 458 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 KLKB1P03952 638 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CALCRP30988 508 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 HSD17B2P37059 387 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 CTAG1AP78358 180 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF385BQ569K4 471 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 EOGTQ5NDL2 527 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 SFXN4Q6P4A7 337 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF322Q6U7Q0 402 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TFAP2EQ6VUC0 442 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF852Q6ZMS4 543 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 REM2Q8IYK8 340 aaPredicted RBP4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR52L1Q8NGH7 329 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 OR6M1Q8NGM8 313 aa4.5□□□□□ -1.69
PTPN13-201ENST00000316707 TREX2Q9BQ50 279 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms