RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 YPEL5P62699 121 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 HHEXQ03014 270 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 TARDBPQ13148 414 aaKnown RBP eCLIP11.65□□□□□ -0.54
RNF4-201ENST00000314289 IQCF1Q8N6M8 205 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 FAM83FQ8NEG4 500 aaPredicted RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 PITX2Q99697 317 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 COPS4Q9BT78 406 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 SARGQ9BW04 601 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 BTBD2Q9BX70 525 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 SLIRPQ9GZT3 109 aaKnown RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 MARCH7Q9H992 704 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 TRPV5Q9NQA5 729 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 KCMF1Q9P0J7 381 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 TMCC3Q9ULS5 477 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CACNA1IQ9P0X4 2223 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 EFCAB9A8MZ26 197 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CDC123O75794 336 aaPredicted RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 H1F0P07305 194 aaKnown RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 SPNP16150 400 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 TNNI3P19429 210 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CBLP22681 906 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 AVPR1BP47901 424 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 RFX3P48380 749 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 PPP5CP53041 499 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 SHC2P98077 582 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 DCST1Q5T197 706 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 MLIPQ5VWP3 458 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 PSD4Q8NDX1 1056 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 TSTD1Q8NFU3 115 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 CDS1Q92903 461 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 RERGQ96A58 199 aaPredicted RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 EFHD2Q96C19 240 aaPredicted RBP11.65□□□□□ -0.54
RNF4-201ENST00000314289 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 ZFYVE21Q9BQ24 234 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 ADAP2Q9NPF8 381 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 NOX1Q9Y5S8 564 aa11.65□□□□□ -0.54
RNF4-201ENST00000314289 SGK494L7N484 410 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ASNA1O43681 348 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 DPM1O60762 260 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 SDC3O75056 442 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 PDE9AO76083 593 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ZIC2O95409 532 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 STSP08842 583 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 DBTP11182 482 aaKnown RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 CHRNB1P11230 501 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ST6GAL1P15907 406 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 JUNDP17535 347 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 DDX5P17844 614 aaKnown RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 PDX1P52945 283 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 PRR5P85299 388 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 MLC1Q15049 377 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 KRT73Q86Y46 540 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 RHOXF1Q8NHV9 184 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 GPBAR1Q8TDU6 330 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 KLHL3Q9UH77 587 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 A4GNTQ9UNA3 340 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 CLCA2Q9UQC9 943 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 CENPVL1A0A0U1RR11 272 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 FAM47E-STBD1D6RA91 191 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 EMC8O43402 210 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 UGT2B17O75795 530 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 UPK1BO75841 260 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 TGM3Q08188 693 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 SUZ12Q15022 739 aaKnown RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 STEAP3Q658P3 488 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ZNF770Q6IQ21 691 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ZC3H14Q6PJT7 736 aaKnown RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 ZNF566Q969W8 418 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 SLC35A4Q96G79 324 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 GSDMCQ9BYG8 508 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 ACOT13Q9NPJ3 140 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 MS4A12Q9NXJ0 267 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 PILRAQ9UKJ1 303 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 CAB39Q9Y376 341 aaPredicted RBP11.64□□□□□ -0.55
RNF4-201ENST00000314289 HS3ST3A1Q9Y663 406 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 PCDH15Q96QU1 1955 aa11.64□□□□□ -0.55
RNF4-201ENST00000314289 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 CPSF4LA6NMK7 179 aaKnown RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 C2orf74A8MZ97 194 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 AGRPO00253 132 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 NDUFB5O43674 189 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 B3GALT2O43825 422 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 KCNK2O95069 426 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 ADRA2AP08913 450 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 HMGA2P52926 109 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 TNFRSF17Q02223 184 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 SLC30A8Q8IWU4 369 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms